KEGG   Ostreococcus tauri: OT_ostta04g00470
Entry
OT_ostta04g00470  CDS       T01358                                 
Name
(RefSeq) Cullin repeat-like-containing domain
  KO
K10609  cullin 4
Organism
ota  Ostreococcus tauri
Pathway
ota03420  Nucleotide excision repair
ota04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    OT_ostta04g00470
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta04g00470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ota04121]
    OT_ostta04g00470
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta04g00470
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ota04147]
    OT_ostta04g00470
Ubiquitin system [BR:ota04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     OT_ostta04g00470
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      OT_ostta04g00470
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      OT_ostta04g00470
Exosome [BR:ota04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   OT_ostta04g00470
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Fuz_longin_1 DUF2774 HTH_36 HTH_Mga
Other DBs
NCBI-GeneID: 9834180
NCBI-ProteinID: XP_022838681
Position
4:71152..73428
AA seq 758 aa
MSSSRRGDHSRSATGEPSTRSNDGRRSAHGAPGTARGLTIKPFKRAPTVPTEFATRARET
LREAIRRVQAKEVTGVSHEALYRHVENLCVHRRAAEAFEDFQSGADRRAREVLRGLEGRK
IEDSGVFLTKFDETWGDYCAQALTLRSIFLYLDRAQANGGGKSSTLWDVSLRVFHEHLEG
TAKSVKGKVVRGLLDLVERERMGEKIDRALAKRVLRALSALGVYQEAFENVFIEASQEFY
RKEGNEYSVQTDVSDYLKHCERRLEEEAERCANYLDAGTAKALMRTCEQGLIEAHIGDIL
DKGFVDLMRQHRLEDLRRLHSLLARMDGLGRLCSAFVTYLKQQGTAIVKDEARDKDMVDR
LLTMKTAVDEVVSKSFGRTIADGSNDIFINGVKESFESFINCRQNVPAELIAKYIDSKLK
SGSKGLSEEELERTLDKALTLFRYIVGKDVFEVFYKKELSKRLLHGKSASIDAERSMIQK
LKAECGSQFTQHLEGMFKDIDLSREIMQSFRQTFENDPIIEMNVNVITAGCWPSYPSVDV
KLPEELANLQEKFMSFYLGKHSGRKLTWQNSEGHCVLKARFDGGMKELSVSLFQCVILML
FNDSKKLSYTEIAQKTGMEEKELKRALQSLACAKVRILNKEPKSREINDDDSFEVNTALN
ERLFRIKVNSIQVKETAEENKQTMERVFQDRQQQIDAAIVRVMKTRKSLTHALLISELMA
QLKFPTKASDLKKRIESLIEREYLERDREDAQTYNYLA
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgtcgtcgagccggcgcggtgatcactcgcgctcggcgacgggcgaaccgtcgacgcga
tcgaacgacgggcgacgaagcgcgcacggtgcgcccgggaccgcgcgcgggctgacgata
aaaccattcaagcgcgcgccgacggtgccgacggagttcgcgacgcgggcgcgggagacg
ctgcgagaggcgatacgacgggtgcaggcgaaggaggtgacgggggtgagtcacgaggct
ttgtatcgacacgtggagaatctgtgcgtgcacagacgggcggcggaggcgttcgaggat
tttcagtcgggggcggatcgacgggcgagagaggtcttgcggggattggagggacggaaa
attgaggattcaggggttttcttgacgaaattcgatgagacgtggggggattattgcgcc
caggcgttgacgctgcggtcaatctttttgtatctcgaccgcgcgcaggcgaacggaggc
gggaaatcgtcgacgctctgggacgtgtcgctgcgcgttttccacgagcatctcgaggga
acggcgaagagcgtgaagggtaaggttgtcaggggcttactcgatctcgtcgagcgagag
cggatgggggagaagattgatagggcgctcgcgaagcgcgttttgcgagcgctgagcgcg
ctcggggtgtatcaagaggcgtttgaaaacgtcttcatagaggcgagtcaggagttctat
cgcaaggaagggaacgagtactcggtacagacggacgtgtcggattacctgaagcactgc
gaacggaggctcgaggaggaggcggagaggtgcgcgaattacttggacgccggcacggcc
aaggcgctcatgcggacgtgcgagcaaggtttgatagaggcacacatcggagacatctta
gacaaggggttcgtcgatctcatgcgtcagcatcgactggaggatttgcggcgcctgcac
tcgcttctcgctcgaatggatggtttgggccgtctgtgcagcgcgttcgtgacgtacctc
aagcagcagggcacggctattgtgaaagacgaggcgcgcgataaggacatggtggatcga
ttactgacgatgaagaccgccgtggacgaggtcgtgagcaaatctttcggtcgaaccatc
gcggacggatccaatgacattttcatcaacggtgtcaaggagtcgttcgagtcattcatc
aactgtcgacaaaatgtccctgcggagctgatcgcaaaatacattgattcaaagctgaaa
agcgggagtaaaggactgagtgaagaggagttggagagaactttagataaggcgctaaca
ttgttcagatacatcgtcggaaaggatgttttcgaagtgttttacaagaaggagctctcg
aagcgtcttttgcacggcaagagcgcgagcatcgacgcggagaggagcatgatccaaaag
ttgaaggcggagtgtggcagtcagttcacgcaacatctggaaggaatgttcaaggatatc
gatctgagtcgcgaaatcatgcaatcgtttcgacagacgttcgagaacgacccaatcata
gagatgaatgtcaatgtcataactgcggggtgctggccgtcgtacccatcagtcgacgtc
aagctcccagaggagctggcgaatttgcaagagaagttcatgagtttctacctcggtaaa
cattcagggcgaaagttaacgtggcaaaactcggagggtcactgcgtcctcaaggcgcgc
ttcgacggaggaatgaaggaactcagtgtctccctctttcagtgcgtcatcctgatgctg
ttcaacgactccaagaagctctcgtacacggagattgcgcagaagactgggatggaagag
aaggaacttaaacgtgctcttcagtcactggcttgcgccaaggttcgaatcctgaacaag
gagccaaaatcgcgcgagatcaacgacgatgattctttcgaggtgaacactgcgctgaac
gagcgtctgttccgcatcaaggtcaactccatccaagtcaaggaaacggccgaggagaac
aagcagaccatggagcgggtgttccaagatcgccaacaacagatagacgccgctatcgtt
cgcgtgatgaagacgaggaagtcgctcacgcatgcgctcctcatctctgaactcatggcg
cagctcaagtttcccaccaaggcgagcgatttgaagaagcgtatcgagagtctcatcgag
cgagagtacctcgagcgcgaccgcgaagatgcgcagacgtataactacctcgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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