KEGG T01358: Ot04g00330

Ostreococcus tauri: Ot04g00330

Entry

Ot04g00330 CDS T01358

Definition

putative indole-3-glycerol phosphate lyase (ISS)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

ota Ostreococcus tauri

Pathway

ota00260	Glycine, serine and threonine metabolism
ota00400	Phenylalanine, tyrosine and tryptophan biosynthesis
ota01100	Metabolic pathways
ota01110	Biosynthesis of secondary metabolites
ota01230	Biosynthesis of amino acids

Module

ota_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:ota00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ota00400]

SSDB

Motif

Pfam:

Trp_syntA His_biosynth PcrB ThiG Ribul_P_3_epim FMN_dh NanE Radical_SAM DUF1341

Other DBs

NCBI-GI:

NCBI-GeneID:

BOGAS:

UniProt:

Position

4:43648..44541

AA seq 297 aa
MSARAPVVSSGRRLSNPTTTASRRMTTRSSATKSVSEQFGAVLRENKRAFIPFICAGDPD
LESTKKALKILDDAGADIIELGVPYSDPLADGPVIQAAATRALEAGATLDKVIALVKEMS
PQIKAPIVMFTYFNPIYQRGVEKFCADIAAAGAKGLLVPDIPLEETYSMSEIASTHGIEL
VLLSTPTTPVERAKKIAQATKGFVYLVSVTGVTGVQTQVASRVESLVEELRAVTDKPIAV
GFGVSQAAQAKQIVDWGADGVIVGSALVRALGEAKTPEEGLAALKAKADEIRSGAKL

NT seq 894 nt +upstreamnt +downstreamnt
atgtccgcgcgtgcgcccgtcgtgagctcggggcgacggctgagcaaccctacgacgacg
gcgtcgagacggatgacgacgcggtcgagcgcgacgaagtcggtgtcggagcagttcggt
gcggtgctgcgagagaataaacgcgcgttcattccgttcatctgcgccggggatccagac
ttggaatcgacgaagaaggcgctgaagattctggacgacgcgggggctgacatcatcgag
ctcggcgtgccgtacagcgatccgctggcggacggaccggtgattcaggcggcggcgacg
cgagcgctcgaggctggggcgactttggacaaggttatcgcgctcgtgaaagaaatgtct
ccgcagatcaaggcgccgatcgtgatgttcacgtactttaatcctatttatcagcgcggg
gtggagaaattttgcgccgacatcgcggcggctggcgcgaagggattgctcgtgccggac
atcccgctcgaggaaacgtactctatgagtgaaatcgcgagtacgcacgggatcgaactc
gtgctgctctcgacgccgacgacgccggtggaacgagcgaagaagatcgctcaggcgaca
aaggggttcgtctacctcgtctccgtcaccggcgtcacgggcgtgcaaacgcaagtcgcc
tcgcgcgtcgagagtctggttgaggagttaagagccgtgacggataagcccatcgcggtc
ggtttcggggtgagccaagccgcgcaagcgaagcagatcgtggattggggtgccgacggc
gtcatcgtcggctcggcgctcgttcgcgcgctcggcgaggcaaagacgcccgaggaaggt
ctcgccgctctcaaggcaaaggcggacgagattcgctctggggcgaagctctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   BOGAS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

Download RDF

DBGET integrated database retrieval system