KEGG T01358: Ot07g02680

Ostreococcus tauri: Ot07g02680

Entry

Ot07g02680 CDS T01358

Definition

tryptophan synthase beta-subunit (ISS)

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

ota Ostreococcus tauri

Pathway

ota00260	Glycine, serine and threonine metabolism
ota00400	Phenylalanine, tyrosine and tryptophan biosynthesis
ota01100	Metabolic pathways
ota01110	Biosynthesis of secondary metabolites
ota01230	Biosynthesis of amino acids

Module

ota_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:ota00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ota00400]

SSDB

Motif

Pfam:

PALP Rubis-subs-bind

Other DBs

NCBI-GI:

NCBI-GeneID:

BOGAS:

UniProt:

Position

7:complement(425279..427870)

AA seq 863 aa
MGVDKGRPTAAPGRGATTTRRAVTPVTPGGDISKEQRPDAAGRYGRYGGKYVPETLIPAL
AELEREYEAIKTDAAFQAELKSVLKDYVGRESPLYHAERLSEAFKDADGNGPEVYLKRED
LNHTGAHKINNAVGQALLAKRMGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAADM
ERQKLNVFRMRLLGATVRPVWAGTATLKDATSEAIRDWVTNVEDTHYILGSVAGPHPYPM
MVRDFHACIGQETRAQAMEKWGGLPDILVACVGGGSNAMGLFHEFINDESVRIIGVEAGG
EGIAPGQKHAATLTLGTPGVLHGSFSYLIQDEEGQIVEPHSISAGLDYPGIGPEHAFLKD
FGRVEYHAITDKEALDAFVNTSRLEGIIPALETSHALAYLWKLCPGLPNGTKVVLNCSGR
GDKXXXXXXXTTSMVGMKSVELLLEVPLDVCIVAPVGDGSAASADDTAKAVVASWERRNR
EVPQAIKDMMFEKNSDARELACALWVLFATRAGGEVWESYASWLPNKRDGLPSMLLAAEE
ELEMMQNESMTARARELRGLVRKAFDRVPFAHGIPGSVTLEDLSWAYALVTSRAIASDVG
KDPDGVDDTQVAVMAPCVDMANHVDVTNVTALKKIGATDGGGLRGAYWRLMTGGSVDGGG
GACCLETNRPITSADEEVTISYQPDATNDELMVSYGFSLKGNRNDRLPSPKDNWLRLGSL
RQAIEDSGVLTMETPEEDARRLIAVLSSACGLSIGQETAPDDDWSFDADGTEREIDNAIA
LGQIWESELTSYATTLEEDEAILASGTNYPTAFGRAAVQYRAERKRLLQSGLGVLNAYVD
WFYSEDDVEVDAVDEEALPIGME

NT seq 2592 nt +upstreamnt +downstreamnt
atgggggtcgataagggacgacccaccgcggcgccgggccggggtgcgacgacgacgcga
cgggcggtgacgccggtgacgccgggtggggacatctccaaggaacaacgcccggacgcg
gcggggcggtacgggcggtacggggggaagtacgtgccggagacgttgattccggcgctc
gcggaactcgagcgcgagtacgaggcgatcaagacggacgcggcgttccaggcggaattg
aagagcgttttgaaggattacgtcgggagagagagcccgttgtatcacgccgaacgattg
agcgaggcgtttaaggatgcggacgggaacgggccggaggtgtatctgaagcgcgaagac
ctgaatcacaccggggcgcacaagattaacaacgcggtcggtcaggcgctgttggcgaag
cgcatggggaagaagcgcatcatcgccgagaccggtgcgggacaacacggcgtcgcgacg
gccacggtgtgcgcgcgattcggtttggagtgtatcatttacatgggcgcggcggacatg
gagcgacaaaagctcaacgtgttccgcatgcgcttgctcggcgccacggttcgcccggtg
tgggcgggcacggccacgctcaaggacgccacgtccgaggccattcgtgactgggtgacg
aacgtcgaggacacgcactacatcctcggttccgtcgccggtccgcacccgtatccgatg
atggtgcgcgacttccacgcgtgcatcggacaagagacgagagcgcaagctatggaaaag
tggggcggtcttccggatatcctcgtcgcgtgcgttggcggtggatccaacgccatgggc
ttgttccacgagttcatcaacgacgagtccgtacgcatcatcggcgtcgaagccggcggc
gagggcatcgcgccgggtcaaaagcacgccgccacgctcacgctcggcaccccgggtgtg
cttcacggctcgttctcctacttgattcaagatgaagagggtcaaatcgtcgaaccgcac
tccatctccgccggtctcgactacccgggcatcggtccggagcacgccttcttgaaggat
ttcggtcgcgtcgagtaccacgccatcacggataaggaggcgctcgacgcgttcgtgaac
acgtcgcgtttggaaggtatcatcccggcgctcgagacttcccacgccttggcgtactta
tggaagctctgcccgggtctcccgaacggcaccaaggttgtcctcaactgctctggtcgc
ggcgacaagnnnnnnnnnnnnnnnnnnnncaccacgtccatggtgggcatgaagagcgtc
gaacttttgctggaagtgccgctggacgtgtgcatcgtcgcgcccgtgggcgacgggtcg
gcggcgagcgcggacgacacggcaaaggcggtcgtcgcgtcttgggagcgaagaaaccgc
gaggtcccgcaagcgatcaaggatatgatgtttgagaagaattcggacgcgcgggagctc
gcgtgcgcgctctgggtcttattcgcgacgcgcgccgggggggaggtgtgggagtcgtac
gcgagctggttgccgaataagcgggacggattgccgtcgatgctgttggcggcggaggag
gagttggagatgatgcagaacgagtcgatgacggcgagagcgagagagttgcgtgggctc
gttcgtaaagcgttcgatcgcgtgccgttcgcgcacgggattccgggaagcgtgacgctg
gaggatttgagctgggcgtacgcgttggtgacgagccgcgcgatcgcgagcgacgttgga
aaggatccggacggcgtggatgacacccaggtagcggtgatggcgccgtgtgtggacatg
gcgaatcacgttgacgtgacgaacgtgacggcgctgaagaaaattggcgccacggatggc
ggtggtcttcgcggagcgtattggcgtttgatgaccggcggtagcgtcgacggcggcggc
ggcgcgtgctgtctggaaacgaaccgtccgatcacgagtgcggacgaagaggtgacgatt
tcgtaccaaccagacgcgacgaacgatgaactaatggttagttacggtttcagtttgaag
ggcaatcgcaacgatagacttccgtcaccaaaagacaattggcttcgtctcggctctctt
cgtcaagcaatcgaggactccggtgtgttgacgatggaaacacccgaagaagacgcgcgt
cggctcatcgccgtcctcagttccgcgtgtggattgtccatcggtcaagagacggcgccg
gatgacgactggtctttcgacgccgatgggacggagcgagaaatcgacaacgccatcgcg
ctcggacagatttgggaaagtgagctgacgtcgtacgcgacgacattagaagaggatgaa
gcgattttagcgagtggtactaattatcccaccgcgttcggccgggccgcagtgcagtac
cgagccgaacggaaacgcctcttacaaagtggtttgggtgttctcaacgcgtacgtcgat
tggttttactctgaagacgacgtcgaagtcgacgcggtggatgaagaggcgctgccgatc
gggatggagtga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   BOGAS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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