KEGG T01358: Ot11g01720

Ostreococcus tauri: Ot11g01720

Entry

Ot11g01720 CDS T01358

Definition

DNA ligase IV (ISS)

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

ota Ostreococcus tauri

Pathway

ota03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ota03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT PTCB-BRCT DUF258 Guanylate_cyc

Other DBs

NCBI-GI:

NCBI-GeneID:

BOGAS:

UniProt:

Position

11:join(299653..302584,302678..302754,302819..303145)

AA seq 1111 aa
MKDAAVDDDDDDYDDDDGDIDDPSAARRERSMDASGGPRYASARDAPFRALARACERVQR
ERGRKKANAARRYAALDAFHDVCLVSTRDGTRCDAFDAYRLLIPTLDKERETYRLKHDAL
AKCVVSAFDMARASEDAKTLEDWKQKGGGNFPQAVREVLERGHLQGREGDADVRELTIGE
VNDTLDELAACESKHERAATLRKLFGKMDAVMVKWACAIILKETKLRMGDKAIMRHYHRD
AEDLFDWTSDLRRVCEDLPRRDVRLKRADINVGEGLINPQLALRKNTADAIMKTLRGRQF
IIETKFDGERIQLHKDGEIINYWTRNMNDFGPRGYDVMNGLFRHLPKRCILDGELLVWNK
LRETWHPFGAIKTLIKAANLRKSKDEVFPLSNDTDDRDDGDDIAGYDPKSSKYEWYQEYM
KKLTYGDLELVYVPFDILYIGDESVRHLQLVERHAKLREHVHPVSAMCGNIKARILLATP
DCEFSKIGSTKQDIERALLEAIEAGDEGLVIKDLNSEWIPGDRSGNWMKIKPDYCKSEDL
DVLLIGGYYGAGELRGGKISQFLVGIIESTNDPTSAHGIKIMSFCKVGTGISATELDDLR
NRLGDYMHREKPREMDYNVTDAYSERPDVWIWPPQRSVVVRVKGDIRCIRSMTYATGYSL
RFPRVTGIRYDKTWSDILTNAELKQIIEEDRPNIAMDMGEGHMNSRKRTRAAALTTLLPA
HLMPVDVSGVVPESEVFKSLQIHIVNCESREQKQELFKAIIARGGRTSEMWHSDVTHSVA
ANRDGAKFIAASHHGDVYTIDWLKQCIQQNRIVTPRPRHRLNLATSTWYGSNIMDRYGDD
HAIPCNEEDIRALLHQVGDQAKRWETSEVPAMVELTREYPNLLKSMKYCTFSECVFEIDD
SCDVQHNEWMSESEHFRLMLHEERFNVELRLRLFGGTMAPEGRSGTHIVRMNDDSVREEY
LDDGRVLVSNGWVTKRTPRCDSSFLEAFVPASAKWLSSVTSGEMCTCENRCHELDRAPLK
HIRQEIHGCRRLAEASASHGRLLRTVLAEYFTRLANIVSAYDGMVVAFLGDAMLAAWLVD
CTSETDERVFDAVRHAYFSAHSILNHVHGCT

NT seq 3336 nt +upstreamnt +downstreamnt
atgaaggacgcggcggtggacgacgacgacgacgattacgacgacgacgacggcgatatc
gatgatccgagcgcggcgcgtcgggagcggtcgatggatgcgtcgggagggccgaggtac
gcgagcgcgcgagacgcgccgttccgagcgctcgcgcgcgcgtgcgaacgtgtgcaaaga
gaacgtgggcgtaagaaggcgaacgcggcgaggcggtacgcggcgctggatgcgtttcac
gacgtgtgcttggtgtcgacgagggatgggacgcgatgcgatgcgttcgacgcgtatcga
ttgttgataccgacgctggataaagagcgagagacgtatcggttgaaacacgacgcgttg
gccaagtgcgtggtgagcgcgttcgacatggcgcgagcgagcgaggacgcgaagacgctt
gaagactggaaacagaagggtggggggaacttcccgcaggctgtgcgagaggtcttggag
cgcggtcatcttcagggaagggagggcgacgcagacgtacgagagctcaccattggcgag
gtaaacgataccttggacgagttagcggcgtgcgagagcaaacacgagcgtgcggcgacg
ctcaggaagctgttcgggaagatggatgcggtgatggtgaagtgggcgtgcgcgatcatt
ctgaaggaaacaaagctgcgaatgggagacaaggcaattatgcgtcactaccacagagac
gcggaggatttgttcgattggacgagtgacttaagaagggtgtgcgaggatttaccgagg
cgagacgttcggttgaaacgcgcggatatcaacgtcggagagggtttgataaatcctcag
ttggcgctgaggaaaaacaccgccgacgccatcatgaagacgctcaggggccgacagttc
atcattgaaacgaaattcgatggagaacgcatccagcttcacaaagacggagaaatcatc
aactactggactcgtaacatgaatgatttcggaccacgcggctacgacgtgatgaacggc
ctttttcgccatctaccgaagcgatgtatcctcgacggcgaactgttggtgtggaacaag
cttcgagagacatggcatcctttcggagcgattaaaactttaatcaaggcggcgaacctg
cgcaagtcgaaagacgaggttttccccttgtccaacgacactgacgatcgtgacgacggg
gatgacatcgctggttatgacccgaagagctccaagtacgagtggtaccaagagtacatg
aagaaactaacgtacggcgatttggagctggtctatgtaccattcgacatcttgtatatt
ggagacgaaagcgttcggcatctccagctcgtcgagcgtcatgcgaaactcagggagcac
gttcacccggtatcggcgatgtgtggaaacattaaagctcgaattttacttgcgactccc
gactgtgagttttctaaaatcggctcaaccaagcaggacatcgagcgcgcattgcttgaa
gcgatcgaagccggtgacgaaggcttggtcatcaaagatctcaatagcgagtggattcct
ggtgatcgtagcggtaactggatgaaaattaaaccggactactgcaagagcgaggacttg
gacgtgcttctgatcggaggatactacggcgctggtgagttgcgtggaggtaaaatttct
caattcctcgttggtatcatcgaatctacgaacgacccaacgagcgctcacggaatcaag
ataatgagcttttgcaaggtcggcaccggcatcagcgccacagagttggatgaccttaga
aaccgtttgggtgactacatgcatagagaaaagccacgagagatggattacaacgtcaca
gacgcctacagcgaaagacccgacgtatggatttggccaccgcagagatctgttgtcgtg
agagtaaagggtgatattcgatgcattcgttccatgacgtacgcgactggatacagcttg
cgctttccacgagtgactggcattcgatacgataaaacgtggtcagacatactcacaaat
gcagagctcaaacaaataattgaagaagacagaccaaacatcgcgatggatatgggcgag
ggacacatgaattctcggaaacgcacgcgcgcagcggcgctcacgacgttacttccggcc
catctgatgcctgttgatgtctctggtgttgtgccggaatctgaagtattcaaaagcttg
cagatacatatagtgaattgcgaaagtcgagagcaaaagcaggaattgttcaaagcaatc
atcgctcgcggtggacgcacgagcgagatgtggcactccgacgtgacgcatagtgtggct
gcgaacagggacggtgcaaaattcatcgccgcaagccaccatggcgacgtgtacacaatc
gattggctgaagcagtgcatccagcagaaccgtatcgtgacgccgcgaccacgacatcgc
ttaaatctcgcgacgtcgacttggtacggctctaatataatggataggtatggagacgac
cacgccattccgtgcaacgaagaggacatacgcgcacttcttcaccaagttggtgatcaa
gcgaagcgttgggaaacatcggaggtcccggccatggtcgaattaactcgcgagtacccg
aacttacttaagagtatgaagtactgtacgtttagcgagtgcgtgtttgaaatcgacgat
tcgtgcgatgttcaacacaacgaatggatgtctgaaagcgaacactttcgcctcatgttg
catgaggagcgattcaacgtcgaactacgtctgcgactgttcggaggaacgatggcgccg
gagggtcgtagcggaacgcacatagtgcgtatgaacgatgattccgtgcgtgaagagtat
ttggatgacgggcgcgtgcttgtatcgaacggatgggtaacaaagcgcacgccgcggtgt
gactcatcgtttctagaggcattcgtaccggcatctgcaaaatggctgtcaagcgtgacg
agcggcgaaatgtgtacgtgtgaaaatcgatgccacgagctcgatcgcgcacccttgaag
catattcgtcaggagatccacgggtgccgccggctcgctgaggcctctgcgtctcacggt
aggctcttgcgaactgtgctcgctgaatacttcacgagacttgctaatatcgtgagcgcg
tacgatggtatggtagtcgccttcctcggcgacgcgatgctcgctgcttggctcgttgac
tgcacttcggaaaccgacgaacgcgtcttcgatgcagttagacacgcgtacttcagcgct
cacagtatattgaaccacgtgcacggatgcacgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   BOGAS (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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