KEGG T01358: Ot15g01870

Ostreococcus tauri: Ot15g01870

Entry

Ot15g01870 CDS T01358

Definition

Translation initiation factor 3, subunit b (eIF-3b) (ISS)

Orthology

K03253

translation initiation factor 3 subunit B

Organism

ota Ostreococcus tauri

Pathway

ota03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:ota03013]

SSDB

Motif

Pfam:

eIF2A RRM_1 RRM_5 RRM_6 TroA

Other DBs

NCBI-GI:

NCBI-GeneID:

BOGAS:

UniProt:

Position

15:join(308011..308046,308094..>310142)

AA seq 695 aa
MDAIPSNFPRDEGARARGSAATLERWRRVMRERDDDGVGTMERLTERLMMDVSRAQDGFV
DWNKVDVESVELPRDEFERAGLDKPVEAEIEELKQESGFASVIVVDNLPMIAEAKYAKLL
SVLTKIFSQIGTIREGGLLMPQDDSKTSLGFAFIEYENEQQAQSAVDQTNGYQLDKKHVF
KVCKFDDFEKYEKVPDEYVAPPPKPFAKRENTQAWMMDQRGRDQFVCRFGDETEIFWNDP
QTKKGEDVYTRTHWTESYVQWSPKGSFLATVHRQGVALWGGESFGRIAKYAHNAVQFIEF
SPCERFLATGSTHEPSKAGETTQVLVNFFDTRSGAKLRTFTGPISDFIAEGQQGLTWPVF
KWAGQSNGKCGAFFAKIATGAISVYEAPEMTLVDKKSIKLPGVVDFCWSPADPILSCFQP
EQNGGNVPARLSLIGLPSKQEVRSKNLFNVVGVNMHWQSGGDYFAAKILRTTKSKKSTYS
GFELFRLREPNCPMEVLELPNKAEKIVAFAWEPKGHRFAIIHGDGARPDVSFYSMKDKQG
NNNCTLIGTIKNKTANHLFWSPNGRVVILAGLKTMNGQFEFFDVDAMDTMASVEHFMATD
VEWDPTGRFVTTAVTSVHQMENGYHKWTFNGKLLYKYGKDRFFQFLWRPRGKSLLSPEQE
ADIEKNIKKYSKRFEEIDEKIRNERIPALRARSAX

NT seq 2085 nt +upstreamnt +downstreamnt
atggacgcgatcccttcaaacttccctcgggacgagggcgcgagggcgaggggatcggcc
gcaactctcgagaggtggagacgcgtgatgcgcgaacgcgacgacgacggggtgggaacg
atggagagactgacggagaggttgatgatggacgtttcacgcgcgcaggatggattcgtg
gattggaacaaggttgacgtggagtccgtggagctcccgcgcgacgagtttgagcgcgcg
ggtttggacaagcccgtggaggcggagatcgaggaattgaagcaagagagcggattcgcg
tcggttatcgtggtggataatctacccatgatcgccgaggcgaagtacgcgaagttgctg
agcgtgttgacgaagattttcagtcagattggaacgattcgagagggcgggttgttgatg
ccgcaggacgactcgaagacgtcgcttggtttcgcgttcattgagtatgagaacgagcag
caagcgcagagcgcggtggatcaaacgaacggctaccagttggacaagaagcacgtcttc
aaggtttgcaagtttgatgactttgagaagtacgaaaaggtgccggatgagtacgtcgcg
ccgccgcccaagccgttcgcaaaacgagagaacacccaggcttggatgatggaccagcga
ggtcgagatcagtttgtctgcagattcggtgacgagacagaaattttctggaacgatccg
cagacgaagaagggcgaggacgtgtacacgcgcacgcactggacggagtcgtacgtgcag
tggtcgccgaaggggagtttcttggccacggtgcacagacaaggagtcgcgctttggggg
ggcgaatcgttcggtcgcatcgccaagtacgcgcacaatgccgtccagttcatcgaattc
tctccgtgcgagcgttttcttgccactggttcgacgcacgaaccgagtaaggcgggtgaa
accacacaagtgcttgtcaactttttcgacacgcgctcgggcgccaagttgcgcacgttc
acgggaccgattagtgatttcatagcggaaggtcaacaaggtttgacctggccggtgttc
aagtgggccggtcagagtaacggcaagtgcggcgccttctttgccaagattgccacggga
gcgatttccgtgtatgaagctccggagatgaccttggtggacaaaaagtccatcaagctt
ccgggtgtggtcgatttctgctggtctccagcggatccgatcctatcgtgcttccagccc
gaacaaaacggcggtaacgtcccggcgcgtctctccttgattggcttgccgagtaagcag
gaagttcgttccaagaacttgttcaacgtcgtcggcgtcaatatgcactggcaatctggc
ggtgattacttcgcggcaaagattttgcgcacgaccaagtcgaaaaagagcacatacagc
ggcttcgaactgttccgattgcgcgagccgaactgcccgatggaagttctcgaactcccg
aacaaggctgaaaagattgtcgcgtttgcatgggagccaaagggtcatcgcttcgccatc
atccacggcgacggcgcgcgtccggacgtctccttctacagcatgaaggataaacaaggc
aacaacaactgcacgcttatcggtaccatcaagaacaagacggctaaccacttgttctgg
agcccgaatggccgcgtcgtcattttggctggcttgaagacgatgaatgggcagttcgaa
ttcttcgacgtagacgccatggataccatggcatccgtcgagcacttcatggccactgac
gttgaatgggaccctaccggtcgcttcgtcaccactgcggtgacgagcgttcaccagatg
gagaatggttaccacaagtggactttcaacgggaagcttctctacaagtatggcaaggat
cgcttcttccagttcttgtggcgtcctcgcgggaagagtctactctcccccgagcaagag
gccgatatcgaaaagaacatcaagaaatacagcaagaggttcgaagagatcgacgagaag
atccggaacgaacggattccagcgctgcgagcgagaagcgcnnnn

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   BOGAS (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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