KEGG T04031: ADJ79

Ottowia sp. oral taxon 894: ADJ79_06150

Entry

ADJ79_06150       CDS       T04031

Name

(GenBank) RNA ligase

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

oto Ottowia sp. oral taxon 894

Brite

KEGG Orthology (KO) [BR:oto00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oto03016]
    ADJ79_06150
Enzymes [BR:oto01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     ADJ79_06150
Transfer RNA biogenesis [BR:oto03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    ADJ79_06150
Prokaryotic type
   tRNA splicing ligases
    ADJ79_06150

SSDB

Motif

Pfam:

RtcB DUF4514

Other DBs

NCBI-ProteinID:

AKU68091

UniProt:

A0A0K1NHD0

Position

1437721..1438959

AA seq 412 aa
MEVNNENGHYLQMQIGGAAPIKMWTRGVPVEEDARQQLKNIASLPVVFKHVAVMPDVHLG
IGATIGTVIPTIKAIIPAAVGVDIGCGMMACKTTLTASDLPDDLGPLRSAIEKAVPHGMT
PKKYGRDKGGWETPPAETDAAWTRLADEFRQLCELHPRLEKTNNYKHLGTLGTGNHFIEI
CLDENQAVWIMLHSGSRGVGNAIGTHFIELAKQDARLHQQNLPDENLAYFEEGARYFGEY
VKAVDWAQKFAAANREVMMTRVINAMRKVIAKPFETHVEAVNCHHNYVQRETHFGQAVFV
TRKGAVSAEKGRLGIIPGSMGAKSYIVRGKGHPDSFNSCSHGAGRTMSRTQAKKLFTEAD
QIRATEGVECRKDAGVIDEIPMAYKDIDAVMAAQADLVDVLHTLKQVVCVKG

NT seq 1239 nt +upstreamnt +downstreamnt
attgaggtgaataacgaaaacgggcattacctgcaaatgcaaatcggcggcgctgcgccc
atcaaaatgtggacccggggcgtgccggtagaagaagacgcgcgccagcaattaaaaaat
atcgccagcctgcccgtggtattcaaacacgtggcggtgatgccggatgtgcatctgggc
atcggcgccacgattggcacggtgattccaaccatcaaagccattattccggcagcggtg
ggcgtggatattggctgcggcatgatggcctgcaaaaccacgctgacggccagcgatttg
cccgacgatctggggccgctgcgcagcgccattgaaaaagcggtgccgcacggcatgacg
cccaagaaatatggccgcgacaaaggcggctgggaaacgccgcccgctgaaacagacgcg
gcctggacccgtttggccgatgaattcaggcaattgtgcgaattacacccgcgcctggaa
aagacgaataattacaaacacctgggcacgctgggcacgggcaaccatttcattgaaatt
tgcctggatgaaaatcaggccgtgtggatcatgctgcattccggctcgcgcggcgtgggc
aatgccatcggcacgcatttcattgaattggcgaaacaagatgcgcgattgcaccagcaa
aatctgccggatgaaaacctggcctattttgaagaaggcgcgcggtatttcggtgaatat
gtgaaagccgtggactgggcgcagaaattcgccgccgccaaccgcgaagtgatgatgacg
cgcgtgattaacgctatgcgaaaagtcattgccaagccatttgaaacgcatgtggaagcg
gtgaattgccaccataactacgtgcagcgcgaaacgcattttggccaggcggtttttgtc
acgcgcaagggcgcggtcagcgccgaaaaggggcggctgggcatcattcccggcagcatg
ggcgccaaaagctacatcgtgcgcggcaaggggcaccccgacagcttcaacagttgcagc
cacggcgcaggccgcaccatgagccgcacccaggcgaaaaaactgttcacggaggccgac
caaatcagggcgaccgaaggcgtggaatgccgcaaggacgcaggcgtgattgacgaaatt
ccaatggcctacaaggacatagacgccgtaatggccgcccaggccgatttggtggacgtg
ctgcacacgctcaagcaggtggtgtgcgtgaaggggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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