KEGG   Oligella urethralis: CEQ07_01500
Entry
CEQ07_01500       CDS       T05343                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
our  Oligella urethralis
Brite
KEGG Orthology (KO) [BR:our00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:our03009]
    CEQ07_01500
Enzymes [BR:our01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     CEQ07_01500
Ribosome biogenesis [BR:our03009]
 Prokaryotic type
  ribosomal protein modification factors
   CEQ07_01500
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM CLP1_P
Other DBs
NCBI-ProteinID: AVL70231
Position
complement(313421..314749)
AA seq 442 aa
MNSPKVGFVSLGCPKALVDSERILTQLRLEGYEISPTYEGADVVVVNTCGFIDSAKAESL
DAIGEALAENGRVIVTGCMGVEEDTIRQVHPSVLSVTGPQQYEEVVRAVHEAAPPMIEHD
PFVDLVPPQGIRLTPRHYAYLKISEGCNHSCAFCIIPSMRGRLVSRPIGDVMDEAKRLAN
AGVKEILVISQDTSAYGVDVKYRTDFWQGRPIKTQMTALCEALSELGLWVRLHYVYPYPN
VDDVIPLMAEGKILPYLDIPFQHASPKILRAMKRPAFEDRTLARIHQWREQCPDITIRST
FIVGFPGETEEDFQYLLDWLTEAQLDRVGCFKYSAVEGAPANELADPVPEEVKQERWERF
MAHQQAISAAKLQKKIGTTIEVLIDELNEQGIAIGRSAADAPEIDGVVYVDSPYELAPGD
IVKCVVTDADAYDLFADTVEEA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaactctccaaaagtcggctttgtcagcttaggctgtcctaaagccttggtagattct
gagcgtattctgacgcaattacgcttagagggttatgaaatctcgcccacctatgagggc
gctgatgtggtcgtggtcaatacttgcggctttatcgacagtgccaaagcagagtccttg
gacgcaattggtgaggccttggcagaaaatggccgagtgattgtaaccggttgcatgggg
gtggaggaagatacgattcgccaagtccatccgagcgtcctatcggttaccggccctcaa
caatatgaagaagtggtgcgcgcggtacatgaagcagcgccaccgatgattgagcatgac
ccctttgtggatttagtgccacctcaaggcattcgtctaacaccgcgtcactatgcctat
ctcaaaatctccgagggctgtaatcactcctgtgccttctgtattatcccctccatgcgt
ggccgcttggtcagccgccccatcggcgatgtgatggatgaggccaaacgcttggctaat
gctggtgtcaaagagattttagtgatttctcaggacaccagtgcctatggcgtggatgtc
aagtatcgcaccgatttctggcaggggcgacccatcaaaactcaaatgacagcgctgtgc
gaggccttaagtgagttaggcctgtgggtgcgcttacactatgtttacccctaccctaat
gtggatgatgtgattccattgatggctgagggcaagatcctgccctacttagatattccg
tttcagcatgccagccccaaaatcctccgtgccatgaaacgaccggcctttgaggatcgc
accctcgcccgtattcatcagtggcgtgagcaatgcccggatatcaccattcgctccacc
tttattgtgggcttccctggtgagaccgaggaggacttccagtatttacttgactggcta
actgaagcccaactcgatcgtgtgggctgctttaagtattcagcggttgagggtgcacca
gcaaatgaactcgctgatccggtacccgaggaggtgaagcaagagcgctgggagcgcttt
atggcccatcaacaagccatttctgccgccaaattgcaaaagaaaatcggtaccaccatc
gaggtgctcattgatgaattaaatgagcagggtattgccatcggtcgttccgcagcagat
gcgccggaaattgacggcgtggtgtatgtggatagtccctatgagctggcacccggcgat
atcgtcaagtgcgtcgtgaccgatgccgatgcctatgatttatttgctgataccgttgag
gaagcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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