KEGG   Oscillibacter valericigenes: OBV_02240Help
Entry
OBV_02240         CDS       T01636                                 

Definition
putative DNA lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ova  Oscillibacter valericigenes
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ova00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    OBV_02240
Enzymes [BR:ova01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     OBV_02240
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     OBV_02240
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(212424..213251)
Genome map
AA seq 275 aa AA seqDB search
MMELPEAITIAEQMNDAVVGKRVRRVLPPSKAHKFCWYAGDPVEYDAAVSGSTVESAEGF
GIFAEMAFDNGKRLCFNDGVNARLVNRADTPKNYQLLMEFNDGTALIFTVAMYGGIILHD
GTYDNDYYLRSRTAISPFSDQFEPYYRKLMAENKPTLSAKAFLATEQRFPGIGNGVLQDI
LFAAGIHPKRKTGTFSDAERDNLLSCIVSVLREMTARGGRDTEKDLSGCPGGYRVKLSKN
TFTSGCPRCRAPLVKEAYLGGAVYYCPSCQPLIKE
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgatggaattgcctgaggcgatcacgatcgccgagcagatgaacgatgctgttgtcggg
aagagagtacgccgcgtcctccccccttcaaaagcacataaattctgctggtatgccggt
gatccggtggaatacgacgccgctgtgagcggaagcaccgttgaatcagccgaggggttc
ggcatcttcgcggaaatggcgtttgataacggaaaacgtctgtgcttcaacgacggcgta
aacgcacgactcgtaaaccgcgctgacacgccgaaaaattatcagttgctgatggaattt
aacgacgggacggctctgatcttcactgtcgccatgtacggcggcatcatcctccatgac
ggtacgtatgataacgactactacctcagaagcaggacggcaatttcaccgttttccgac
cagtttgaaccctattaccgcaaactgatggcggagaacaaaccgaccctaagcgcgaaa
gcattccttgcaaccgaacagcgctttcccggcatcggaaacggcgtgctgcaggacatc
ctgtttgccgccggaatccacccaaagcgaaaaacagggacattcagcgatgctgagcgg
gacaaccttctttcctgcattgtttcggttcttcgtgagatgacggctcgcggcgggcgg
gacacggaaaaggacctctccgggtgcccgggtggctaccgggtcaagctgtccaagaac
acgtttacctccggttgtccgcggtgcagagcgccgcttgtgaaagaggcctatctggga
ggagcagtgtattactgcccatcgtgtcaaccgttaataaaggaataa

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