KEGG   Oscillibacter valericigenes: OBV_02780
Entry
OBV_02780         CDS       T01636                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ova  Oscillibacter valericigenes
Pathway
ova03410  Base excision repair
ova03430  Mismatch repair
ova03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ova00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OBV_02780 (recJ)
   03430 Mismatch repair
    OBV_02780 (recJ)
   03440 Homologous recombination
    OBV_02780 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ova03400]
    OBV_02780 (recJ)
DNA repair and recombination proteins [BR:ova03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     OBV_02780 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     OBV_02780 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      OBV_02780 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 DUF4159
Other DBs
NCBI-ProteinID: BAK97476
Position
complement(263122..265224)
AA seq 700 aa
MKFAKWNISAPAPGAVDALRQAGYPALLAAVLASRGVSSAEEAAARLECDDVLSFSPFVM
ADMGKAVERIRRAVSGGETIAVFGDYDVDGITSTVLLLDYLKGCGARCLRYIPRRIEDGY
GLSCDAIQSLRDQGATLMVTVDCGVTGAEEVDFANSIGLDVVVTDHHECKGPLPGAVAVV
DPHRPDCPYPFKHLAGVGVALKLVLALGGSGNEERIFSRYCTLAAIGTVADVMRMEGENR
VIVLRGLNALPRTDFVGIHALLREVGLDGKPITSVQIGFTLAPRINAAGRMGAADLAVDL
LETEDPGRAEELARELCDLNRERQAVEQDICADAMRQIESLPESARSALVLSSDEWHQGV
VGIVASRLSEKYACPSFMIHTQDGMGKGSCRSFGGFNLFAALEACSSLLEGFGGHELAAG
FTIRKENIAPFRERMNGYVRAHCGRGIPVSALEIDAAVTDPVDLTMDEVEQLGRLEPYGA
GNPRPVFALLGARVEVLQSVGQGRHLKLQLSKGLCRFDAIFFSVTAEECGIRVGDRVDSV
FYLQGNTFRGRTTLQLQMIDLRLSRVPSRHETENLELVKHLARGGSLTAQEADRLNVSLD
QFRALLRAMRRLLPGGRARVAKLPFLRTAGELAGGREPFLRAALALAVFEERKLLLVAAV
DEELLDIALLPWEDSVDLYACPLLRKLRAGTETWEGREAL
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgaaatttgcaaagtggaacatcagcgcgcctgcgccgggggcggtggacgcgctgcgt
caggcgggatatcccgccctgctggccgcggttctggcgagccggggcgtttcctctgcg
gaggaggccgccgcccgactggagtgcgacgacgtgctgtccttctccccatttgtcatg
gcggacatgggcaaagcggtggagcgcatccgccgcgccgtatccggcggggagaccatc
gccgtcttcggcgactacgacgtggacggcatcacctccaccgtcctgctgcttgactat
ctgaagggctgtggcgccaggtgcctgcgctatattccccggcgcatcgaggacggatac
ggcctgagctgcgacgcgatccagtctctccgggaccagggagccacgttgatggtgacg
gtggactgtggcgtcaccggcgcggaggaagtggattttgcgaactccataggtcttgac
gtggtggtcaccgaccaccacgagtgcaaaggtccccttcccggcgccgtcgccgtggtg
gaccctcaccggcctgactgcccctatcccttcaagcatctggcgggggtgggcgttgcg
ctgaagctggtgctggccctgggcggctccggcaacgaggaacggatcttttcccggtac
tgcactctggccgccatcggcaccgtggccgacgtgatgcggatggagggcgagaaccgg
gtcatcgtcctgcggggactgaatgcgctgccccgaacggattttgtgggcatccacgcg
cttttgcgggaggtgggactggatggcaagcccattacctccgtccagatcggtttcact
ctggccccccggatcaacgccgccgggcgtatgggcgcggcggatctggccgtggatctt
ctggagaccgaggaccccgggcgcgccgaagagctggcccgggaactgtgcgatttaaac
cgggagcgacaggctgtggaacaggatatctgcgccgacgccatgcgccagatcgagtcc
ctgcccgagtccgcccgctccgcattggtgctgtccagcgacgagtggcatcagggtgtg
gtggggatcgtggcctcccgcctcagtgagaagtacgcctgtcccagttttatgatccac
acccaggatggtatgggcaagggctcctgccggagcttcggcgggttcaacctctttgcc
gcgctggaggcatgttccagtctgctggaggggtttggcggccatgagctggccgccggt
tttaccatccggaaggagaatatcgcccccttccgagagagaatgaacgggtatgtccgc
gcacactgcggcaggggcatcccggtgtcggctttggagattgacgccgccgtgaccgac
cctgtggatctgacgatggacgaggtggaacagctgggccgcctggagccttacggcgcc
ggaaatccccggcccgtgtttgccctgctgggcgcgcgggtggaggttttacagagcgtg
ggacagggacggcatttgaaattgcagctgagcaagggcctgtgccggtttgacgccatt
tttttctccgttacggcggaggagtgcggcattcgggtaggtgaccgggttgactccgta
ttctatcttcagggcaacaccttccggggccggaccaccctgcaactgcagatgattgac
ctgcggctcagccgcgtccccagccgccacgagacggaaaatctggagctggtgaagcat
ctggcccgcggcggaagcctgacggcccaagaggccgaccggctgaatgtctccctggac
caattccgcgcgctgctaagggccatgcgccgcctgctgcccggcgggcgggcgcgggtg
gcaaagctgccgtttcttcggacggccggcgagttggccggcggccgggagccgtttttg
cgggccgcactggctctggcggtgttcgaggagcgaaagctcctcctcgtcgccgccgtg
gatgaagaacttttggacatcgcgctgctcccctgggaggacagcgtggatctttatgcc
tgccccctcctgcgaaagctgcgggccgggacagagacctgggaggggagggaggccctg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (92)   
   KEGG ORTHOLOGY (1)   
   RefGene (89)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (102)   

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