KEGG   Oscillibacter valericigenes: OBV_06200
Entry
OBV_06200         CDS       T01636                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
ova  Oscillibacter valericigenes
Pathway
ova03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ova00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    OBV_06200 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ova03400]
    OBV_06200 (uvrB)
DNA repair and recombination proteins [BR:ova03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OBV_06200 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      OBV_06200 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_5 Microtub_bd SWI2_SNF2 Kinesin HEM4 DUF87
Other DBs
NCBI-ProteinID: BAK97818
Position
587713..589680
AA seq 655 aa
MPKFKVVSPYEPSGDQPEAIEKLAQGIENGLDEQILLGVTGSGKTFTMAKVIEKIQRPAL
VLAHNKTLASQLCEEFKAFFPDNAVEYFVSYYDYYQPEAYIPHTDTYIAKDASTNDEIDR
LRLSATCSLLERRDVIVVSSVSCIYGLGEPEDFAKLMISMRVGMKLDRDELLRRLVEDRY
ERNDIAFERNMFRVRGDTVEIYPAYYKDRALRVEFFGDEIDRITEFNPVTGAACHLLEHA
VVYPASHYVTTKDKMDRAIGEIRREMDEQVRYFTEQNKLVEAQRIKQRTEYDIEMMTELG
YCSGIENYSRIISERPAGSAPMTLLDFFPKDFMLFVDESHVTLPQVRAMYNGDHARKQSL
IDYGFRLPCAYDNRPLKFEEFEGRVGQAVYVSATPGPYERERTGQVVEQVIRPTGLLDPE
VEVRPVEGQIDDLIAEIEARSAKRERVLVTTLTKKMAEDLTEYFKNAGIKVRYMHSDVET
IERMEIIRGLRLGEFDVLVGINLLREGLDLPEVSLVAVLDADKEGFLRSETSLIQTMGRA
ARNAEGKVILYADTITRSMRAAMDETERRRKIQDDYNKAHGIVPRTIIKDVRDTLEISKS
ADPDTARKRNKTKLTDQERTEEIVRLEKEMKEASKMLEFEYAAILRDRIVELRGK
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgccgaaatttaaggttgtttctccctatgagccctccggcgaccagccggaggccatc
gaaaagctggctcagggcattgaaaatggcctggacgagcagatattactgggtgttacc
gggtcaggcaagacctttaccatggcaaaggtcatcgagaaaatccagcggcccgcgctg
gtgctggcccacaataagacgctggcgtcccagctgtgcgaggagttcaaggcgtttttt
ccggacaacgcggtggaatacttcgtctcctattacgattattatcagccggaggcctat
attccccacacggatacctatattgccaaggatgcctctaccaacgacgagatcgaccgc
ctgcgcctctccgccacctgctcgttgctggagcggcgggatgtgatcgtggtgtcttcc
gtctcctgcatctacggattgggcgagccggaggactttgccaaactgatgatctccatg
cgtgtgggtatgaagctggaccgggacgagctgctgcggcggctggtggaggaccggtat
gagcgcaacgacatcgcctttgaacggaatatgttccgcgtccggggcgatacggtggag
atttatcctgcctattataaggatcgggcccttcgggtggagtttttcggggatgagatt
gaccgtatcacggagttcaatcccgtcaccggcgcagcctgccatctgctggagcacgcg
gtggtttatcccgccagccactatgtcaccaccaaggacaaaatggaccgggccatcggc
gagattcgccgggagatggatgaacaggttcggtactttacagagcaaaacaagctggtg
gaggcccagcgcattaaacagcgcacggaatatgacatcgaaatgatgaccgaattgggg
tactgctccggtattgagaactattcccgcattatctccgagcggcccgccggttctgcg
cccatgacgctgctggactttttccccaaggactttatgctctttgtggatgagagccac
gtgacgctgccccaggtgcgggccatgtacaacggcgaccacgcccgcaagcagagtctg
atcgactatgggttccgcctgccctgcgcatatgacaaccgccccctcaaatttgaggaa
tttgaggggcgcgtgggtcaggcggtgtatgtctcggccactcccggcccttatgagcgg
gagcggacgggccaggtggtggagcaggttatccgccccacgggtcttctggacccggag
gtggaggtgcgcccggtggaggggcagatcgacgatctgattgcggagatcgaggccagg
tctgcaaagcgcgagcgggtactggtgaccacgctcaccaaaaagatggcggaggacttg
acggagtatttcaaaaacgccgggatcaaggtgcgctatatgcattccgacgtggagacc
atcgagcgaatggagatcatccgcggactgcggctgggggagtttgacgtgctggtgggc
atcaacctgctgcgggagggactggatcttccggaggtgagtctggtggctgttctggac
gcggacaaggaggggttcctccgcagcgagacttcccttatccagaccatgggccgggcg
gcccgaaacgccgagggtaaggttattttatacgcggacaccattacccgctccatgcgg
gcggccatggacgagacggagcgccgccggaaaattcaggacgattacaacaaagcccac
ggcatcgtgcccaggaccatcattaaggatgtgcgggatacgctggagatctccaagtca
gccgacccggatacggcgcggaaacgcaataagaccaagctcaccgatcaggagcggacg
gaggagattgtgcgccttgaaaaagagatgaaggaagccagtaagatgctggaattcgag
tatgccgctatcctgcgggatcgtatcgtcgagctgcgggggaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (139)   
   KEGG ORTHOLOGY (1)   
   RefGene (136)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (156)   

Download RDF
DBGET integrated database retrieval system