KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_00289
Entry
T265_00289        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovi03019]
    T265_00289
   03041 Spliceosome [BR:ovi03041]
    T265_00289
   03036 Chromosome and associated proteins [BR:ovi03036]
    T265_00289
Enzymes [BR:ovi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     T265_00289
Messenger RNA biogenesis [BR:ovi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     T265_00289
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     T265_00289
Spliceosome [BR:ovi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    T265_00289
Chromosome and associated proteins [BR:ovi03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    T265_00289
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 20314477
NCBI-ProteinID: XP_009162298
UniProt: A0A075ACU7
Position
Unknown
AA seq 1093 aa
MRVNISCNANGFLSRSTPTKFSTQDVQKTSPPLSVSRGPPLEWLPASNPWTMKRVSRCLI
SFPWRTVASGGTQFLLTPCLNKAWQTGFLPLTQQTPGWDIGTHIHFFHTENIKSSATPFF
HLCLSGERQPLTDKNKTDPGNVGKILDPVYQSFGYLSIGESTQQLTDGSYFYANNPQVLK
NFATIPNGAPKRTGARLGRFAATDNSVTPLDGFSLVSQWGIANKLDNVGLFGPPPLIPEN
GQPKQGNFNSRPYRKSYNNQSTWLQQPSKKLEQELFGQPKRGLNFQLYDSIPVTQSGPNW
SPVKPITSFKDVELHQTIKENIERAQYIHPTPVQKYALPIIAAKRDLMACAQTGSGKTAA
FLLPILNQLFQEEKTEPAVVNGGACPVALVLAPTRELSCQIFDEARKFAYQSDVRPCVVY
GGASIFLQVRELQHGCDLLVATPGRLVDMISRGNVSLDHVKYLVLDEADRMLDMGFEPQI
RRIVELHRMPPAGQRQTLMFSATFPKEIQTLARDFLHSYIFLAVGRVGSTNENITQEVWN
VADKDKPELLVRLLQQKDPEGLVLVFVETKRGADLLAKFLGQLNFPVTSIHGDRPQAERE
NALSSFRDGLTPILIATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRMGQPGSA
TSFFSDRNQNVVRDLVELLRESKQSVPAWLEARLSYSTTGDNRRSKGNNSSKRRANYASL
DYRQHGIRGTSFVSTVSMANNNSIPNGGFGLLGNCSVPLAAVGNGPRYPQNTGYSAAYHP
VSQQQQQQQQQSARFMYRNGPNYLGRGSNFGSHLEQQPPPMPQPLPLFPPQHRPQVTHPT
ALLPTGAPPAAMMHQFLAAAAAAGLTPGHGNVGSANGQPGTGISVSTGGYSGHIAHGAAF
PTATYQAFHPASIFSASNPLPGHPVSSHARDGPATAVVFPPSAGMFPTVNSGTLGGTAPT
FSTTNSADHQALQQPHPAAALIPNSFHLSYYGQQPFGPGSAAPQRQSPHQQQAAVAAAMA
VAAAMSNGAQPTAAGIDPSGAISVQPVHTENPIPVEGTTASSPSAGSVKAGAVVQQAYRG
NGMGEWWPAPTPT
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgcgagtaaacatttcctgtaatgccaatggcttcctttcaaggagtacgccaaccaag
ttttctactcaggacgtacaaaagacgtcacccccattgagcgtgtccagagggccacca
ctagaatggttgccggcctcaaatccgtggactatgaaacgcgtctcgcgatgcttgatc
tctttcccctggagaaccgtcgcctccggggggacccaattcttacttacgccctgtttg
aacaaagcttggcaaacaggttttttaccgttgacccagcaaacacccggctgggacata
ggcacacacattcacttttttcatactgagaacataaagagcagtgctacaccctttttt
cacttgtgcctttcaggtgaacgacagccactaaccgacaagaacaaaaccgacccggga
aacgtgggcaaaatcctcgaccctgtgtatcaatccttcggttacttgagcattggagaa
agcacacagcagctaaccgatgggtcctacttttacgccaacaaccctcaagtcctgaag
aattttgccactattcctaatggggcaccaaaacgcactggtgcccgtctgggacgtttt
gcagccaccgacaacagcgttactccacttgatgggttttcgctggtcagtcaatgggga
atcgcaaacaaactggataatgtgggcctattcggtcctcctccacttatccctgagaat
gggcagccaaaacaagggaatttcaattcacgaccttataggaagtcttacaacaaccag
tcaacatggcttcaacaaccatccaaaaagctggaacaggagttgtttggacagccgaaa
cggggcttgaactttcaattatatgacagcataccagtcacccaatccggacctaattgg
tctcctgtgaaacctataacttcgttcaaggatgttgagttacatcaaactataaaagaa
aatattgagcgtgctcagtacattcatccaacacctgtgcaaaaatatgctttgccaata
atcgctgcaaaaagagatcttatggcctgtgcgcaaacgggatctgggaagacggctgcc
tttctacttcccatcctcaatcaactttttcaagaagaaaagacggaaccagctgtcgtt
aacggcggagcttgtcctgtggctcttgttttggcaccaaccagagagctttcttgtcag
atattcgacgaagctcggaagttcgcttaccagtctgacgttcgtccttgtgttgtctat
ggtggggcatctatttttctgcaagttcgtgaacttcaacatggctgtgatcttcttgtg
gccacacccggtcgcttggtggacatgataagtcgcggaaacgttagtttggatcatgtc
aagtatctagttttagatgaagccgatcgtatgctagacatgggatttgagccacaaatt
cgtcgcatagtggagttgcatcgcatgcctcctgccggacagcgacaaaccttgatgttc
tccgcaacctttccaaaggagattcagacactcgcccgggatttcctacactcttacata
tttctcgctgttggccgcgtgggtagtacaaatgagaacataactcaggaagtatggaac
gtggccgacaaggataaaccggagcttctggttcgcctgcttcaacaaaaagatcccgaa
ggtctggtgcttgttttcgttgagaccaagcgtggagctgatttacttgccaagtttctg
ggtcagctcaattttcctgttacgtccatccatggcgaccgcccacaagctgaacgggag
aacgccctctcttcgttccgtgatggacttactcctatcttaattgctaccgctgtggct
gcacgaggtctcgacatacccaacgtcaagcatgttatcaacttcgacctgccgtcggat
attgaagaatatgtgcatcgcattggacgtactggtcggatggggcaaccaggttcggca
acctcgtttttttcggatcgcaatcaaaatgtagttcgggatctggttgaattactgcgc
gagtccaaacagtccgttcctgcttggctggaggcacgcctgtcctattcgactactggt
gataatcgtcgatccaaggggaataactcttccaaacggcgggccaactacgcatcgcta
gattaccgacaacatggaatccgtgggactagcttcgtcagcaccgtctcaatggcgaat
aacaatagcattccaaacggtggatttggcttgctgggtaactgttcggtaccactggct
gctgttggcaatggtcccaggtatccacaaaataccggctacagtgctgcatatcatcct
gtcagtcagcaacagcagcagcaacaacaacagtcagctcgattcatgtatcgtaatggt
ccaaactatttgggacgtggatctaattttgggagccacttggagcaacaacctccgccg
atgccgcaaccacttccattatttccaccacaacatagacctcaagtaactcaccccaca
gctcttttaccaaccggagcacctccagcagccatgatgcatcaatttttggcagctgca
gcagcagctggtctcactccaggtcacggaaatgttggttctgcgaatgggcaacctgga
acagggatttctgtctccacgggcgggtacagcggccatattgcgcatggtgccgctttc
cccactgctacataccaggcgtttcatccggcgtccatattttctgcgtcaaacccactc
ccgggtcatccggtttcatcacacgccagagatggtcctgcaactgctgtggttttccct
ccttccgctggaatgtttccgacagtcaattctggtactctgggaggaacggctccgact
ttcagtaccaccaactctgccgatcatcaagctttacagcaaccacatcccgctgcggct
ctaataccgaacagtttccacttatcctattatgggcagcaaccgtttggtcctggatcc
gctgcaccacaacgtcagtcgccccatcagcaacaggctgcagttgcagcggcaatggca
gtcgcagcagccatgtctaacggcgcacaaccgactgccgctggcatagatccttcaggg
gcgatctctgtccagccagttcatacggaaaacccgataccggtggaaggcacgacagct
tccagcccttctgccggttctgtcaaagctggggctgtggttcaacaagcctacagagga
aacggtatgggagaatggtggccagccccaactcccacttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (63)   

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