KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_11825
Entry
T265_11825        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    T265_11825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovi03019]
    T265_11825
Enzymes [BR:ovi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     T265_11825
Messenger RNA biogenesis [BR:ovi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     T265_11825
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N AAA_16 CbiA nSTAND3 ATP_bind_1 AAA_24 TniB AAA_22 RsgA_GTPase MMR_HSR1 KTI12
Other DBs
NCBI-GeneID: 20325993
NCBI-ProteinID: XP_009176868
UniProt: A0A074YXJ2
Position
Unknown
AA seq 443 aa
MNGEKDTHRLNPNVRTYTLEKYQMLRFEVSSPSSLVLVSGTAEIYGTELVCSSELLLNAG
VRGTVVTFHGCKIVVNGPDITTFLMNVAEDQEIAHVYMNIHASLEVLRQKAVKEQSRGPR
VLVCGHESVGKSTLCRTLASYAARRKHKPILVDVNVGLNQVCLPTTIAAVAVSKPYDLME
GWGLEEDPLVFCFGHVNPASNLNLFREQVNRLAELVNIRSENDTKIFTSGCIINMNGFRK
DDSDGGTSKEKGIQAIRATAAAFEVDTILVIEDGFLETFLREDLPPEVTIARLPKSSGVV
TRSADQWTRQRDARVCAYLHGENPFRRLHPHQITLKTSEYSIYKVGSEAIPDALLPHGAK
EDEETWRNPVLVPIGRDLKNHLLAVSQASEPQHVPDAPVYGFVVIVNVADDKSSFTVLSP
CPYAPPNNLFLLTTICYVDPELI
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaacggtgagaaggatacccatagactcaatcccaatgttcggacttacactttggag
aaatatcagatgcttcggttcgaggtgtcctcgccgtcgagtctggtccttgtctctggg
acggcggaaatttacggcactgagttggtttgcagttctgaacttttgttgaatgctgga
gttcgcggaaccgttgtaacattccatggctgtaagatcgtggttaacggtccggacata
actacgttcctgatgaacgtagctgaagatcaggagattgcacacgtctacatgaacatc
cacgcgagtctagaggttttacgtcagaaggcggtcaaggaacaaagtcgtggaccgcgc
gtgcttgtgtgtggacatgaaagtgttggaaagtctacgctgtgccgcactctagccagt
tatgctgcacgtcgaaaacacaaacctattcttgtggatgtcaatgtcgggcttaatcag
gtatgcctaccaactacaattgctgcggtggccgtctcaaagccgtacgatctcatggaa
ggttgggggctcgaggaggatccgttggtgttttgcttcggtcatgtcaacccggcgagt
aatctcaacctgttccgtgagcaagtaaatcggcttgccgagctggtcaacatccgatcg
gaaaatgacacaaaaatttttacaagtggctgtattattaacatgaacggattccgcaaa
gacgattccgatggtggcacgagcaaggagaagggcatccaggcaatacgtgcgacagcc
gcagcgttcgaagtcgatacgatactcgtcatagaggatggtttcctcgaaacattcctg
cgtgaagatctaccgccggaagttaccatcgctcgtttgccaaaatcctcaggtgttgta
acacgcagtgcggatcagtggaccagacaacgcgatgcgcgcgtatgtgcctatctacat
ggagaaaatcctttcagacgcctgcacccccatcaaatcacgcttaaaaccagtgaatac
tcaatctacaaggtaggcagtgaggccattcccgatgctctactcccgcacggcgcaaaa
gaggatgaagaaacgtggaggaatccagttttggtcccgataggccgggatctgaaaaac
cacctactcgctgtgtctcaagcttctgagcctcagcatgttccagatgcaccagtttac
ggtttcgtagtgattgtaaatgttgctgatgacaaatcgtctttcactgtcctcagtccg
tgtccgtatgctcccccaaacaatttgttcttactcactaccatatgttatgtcgatccc
gaacttatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (36)   

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