KEGG P.abyssi: PAB0122

gn:T43614 : No such data.

Pyrococcus abyssi: PAB0122

Entry

PAB0122 CDS P.abyssi

Gene name apu

Definition amylopullulanase

Class

SSDB

Motif Pfam: DUF2223 Glyco_hydro_57 DUF2147 Colicin Secretin_N Herpes_gE
DUF819 Mucin
PROSITE: THR_RICH

Other DBs NCBI-GI: 14520398
NCBI-GeneID: 1495067
IGM_Orsay: PAB0122
UniProt: Q9V294

Position 180434..184522

AA seq 1362 aa
MRGKFRALFVLVIFVISVLGPGIKSVNAAEPKPLNVIIVWHQHQPYYYDPILGVYTRPWV
RLHAANNYWKMAHYLSKYPDVHVTIDLSGSLIAQIADYMRGKKDIHQIITEKIAKGEPLT
VEEKWFMLQAPGGFFDHTIPWNGEPVADKNGNPYRRFWRRYTQLKDKMLDAKNKYSNLPL
EEQKIAVTSEFTEQDYIDLAVLFNLAWIDYDYIMNTPELKALYDKVDTGGYTRKDVETVL
KHQMWLLNHTFEEHEKINLLLGNGNVEVTVVPYTHPIGPILNDFGWYEDFDAQVKKANEL
YKEYLGAGKVTPKGGWAAESALNDKTLEILAENGWKWVMTDQLVLEKLGVPKTIESYYKP
WVAQFGDKKIYLFPRNHDLSDRVGFRYAGMNQYDAVKNFVEELLKIQKQNYDGSLVYVIT
LDGENPWEHYPFDGKLFLEELYRQLEELQKKGLIRTVTPSEYIEMFGDKANKLTPKMMKR
LDFTTEDNVNALLKAKTLGELYDMVGVTEEMQWPESSWIDGTLSTWIGEPQENIAWYWLY
LARKALFENKDNVKDWNKAYEYLFRAEGSDWFWWYGRDQNSMQDYVFDRYFKLYLYEIYK
LAGLEPPSYLFGNYYPDGEPYIVRALVGLPEGVKKNWSSLSPLAKGIEVYFDDEGLHFVV
LTNRSFEISIYEPEKIIGNTFTVLQKKPEEFRYSEVPFSKDSVGLLITTHITVKGERGEV
FKATSYDNYKKVGEVKVNAINGGYEVVVPFDYIETPSDFYFAVSTINDNGSLEIITTPIH
LKLPKEIEGTLITEIKDIEGDDHGPGNYTYATDKVFVEHHLDLLKVRLLERPNSYVFEFY
FKELGDNPWNAPYGFSLQIMEVYLDYKEGGNTSAIKMFPDGPGSNVDLDPEHPWDVALRI
AGWDYGNIIVLANGTTYQGEMKISADPVKNRIIVEVPKKYLPKVPEFMAVLVGSQDGFGP
DKWRPVSVKAEQWVGGGAPADAVIAGVAPRVYDLLVPEGFEPTQEEQLSSFDPKAGKRAV
VKMIPVKAKTNVIVDMKDIEGDDHGPGTYTYATDKVFVEHHLDLLRFRMLDTGDTYTLEF
YFKELGDNPWNAPYGFSLQIIEVYLDFKEGGNTSAIKMFPDGPGSNVDLDPEHPWDVALR
IAGWDYGNIIVPANGTVYTGEMKISADPIKNAIIVEVPKKFISLDKNYGLYGAVLVGSQD
GFGPDKWRPVSVKAEQWVGGGASAEAVIAGVAPRVYDLLVPQGFRPTQEEQLSSFDPKAG
KRAIVKMIPLWSVPKEEKPSQTGTTTTRTPTKTSTPTPEKTTPKTTKTKTETKESPSPSQ
TPPSAGAPPSGEERTTQKTGGICGPAFVLVIVAIVAIARKRF

NT seq 4089 nt +upstreamnt +downstreamnt
atgagggggaaatttagggctttgttcgttttagtaatatttgtaattagcgtactaggg
ccaggaattaaaagcgtaaacgcagcagaaccaaaaccattaaatgtgataatcgtttgg
catcagcaccaaccgtactattatgacccaattttaggcgtttacacgagaccttgggtt
agacttcatgcggcaaataattactggaagatggcccactatctatcgaagtatccagat
gtccatgtcacaatagacctctctggctcattgatagcgcaaatagctgattatatgaga
ggaaagaaggacatacaccagataataactgagaagatagccaaaggagagccattaact
gttgaagaaaaatggttcatgcttcaggctcctggagggttctttgatcatacgataccg
tggaacggagaaccggtagccgataaaaacgggaacccctataggagattctggaggagg
tatacccagcttaaagacaagatgctcgatgcaaaaaacaagtattcaaatctacctctg
gaagaacagaaaattgccgttactagtgaatttactgaacaggactacattgacttggcg
gtactcttcaaccttgcttggatagattatgattacataatgaataccccggaactcaag
gctctatatgataaggttgataccggtggatacacgagaaaagacgttgaaactgtactt
aaacaccagatgtggttactaaatcacacgtttgaagagcatgaaaagatcaacttgcta
ctaggaaacggaaatgttgaggtgaccgtcgttccatatactcacccaatcgggccaatc
ctgaacgatttcgggtggtacgaagacttcgatgcccaagttaagaaggccaatgaatta
tataaagaatatctgggggcagggaaagttacaccaaaaggtggatgggcagctgagagt
gctctcaatgataagacattagagatacttgcagagaatggctggaaatgggttatgact
gatcagttggttctagagaagctaggagttcctaaaacaattgaaagttactataagccc
tgggttgctcagtttggggataagaagatttacctgttccccaggaatcatgaccttagc
gatcgtgtaggatttaggtatgccggaatgaatcaatatgatgccgtgaagaacttcgta
gaggaacttttgaagattcaaaagcagaattatgatggttctttagtctacgttataacc
ttggatggcgagaatccctgggagcactatccctttgatggtaaactcttcttggaggag
ctttataggcaattggaagagttacagaagaagggcctaataagaacggttactccgagc
gagtacatagagatgttcggggataaggcgaacaagctaactccaaagatgatgaagagg
cttgatttcacgacggaagataatgttaatgctttactaaaggcaaagacattgggcgaa
ctgtacgatatggttggagttaccgaggaaatgcagtggccggagtccagttggatagat
gggaccttatcaacttggatcggtgaaccccaggagaatatagcttggtactggctttat
ttggcaaggaaagctttattcgaaaataaagacaacgtgaaagattggaacaaggcttac
gaatacctctttagggcagagggaagcgattggttttggtggtatggaagggatcagaac
agtatgcaggattacgtctttgacaggtacttcaagttgtacctttatgagatctataaa
ttggctggactggaacctccgagctatttgtttggaaattactacccagatggtgagcct
tacatagttagagctcttgtggggctaccagaaggtgttaagaagaactggtccagcttg
tcaccactagcaaagggtatcgaggtatattttgatgacgagggattgcactttgtagtt
cttaccaataggagctttgagatcagtatttacgagcctgagaaaataattgggaatacc
ttcacagtgcttcagaagaaacctgaagaatttagatactctgaagttccattctccaag
gatagtgttggtctcctaataacgacccatataactgtaaaaggtgaaagaggagaggta
ttcaaggccactagctacgataactacaagaaagttggagaggttaaagtgaatgccatt
aatggcggttacgaagttgtagtgccattcgactacattgaaactccctcggacttttac
ttcgccgtgtcaacgataaacgacaatggaagccttgaaataataaccacaccaattcac
cttaagttgccaaaggagatcgaagggacgctgataactgaaattaaggacatagaaggt
gacgatcacgggcctggaaactacacctatgccacggacaaagtgttcgttgagcatcac
ctggacttgctgaaggttagactacttgagagaccaaattcttacgtctttgagttctat
ttcaaggagcttggtgataacccgtggaacgctccttacggattcagcctccaaataatg
gaagtgtatctcgattacaaggaaggcggcaatacctctgcaattaagatgttcccagat
gggcctggaagtaacgttgatttagacccagagcatccctgggacgttgctttaaggatt
gcaggatgggactatggaaatattatcgttctggctaatggaaccacatatcaaggagaa
atgaagatatctgcagaccccgttaaaaataggataatcgttgaggttccaaagaaatac
ttacctaaggttccggagttcatggcagtattagttggatctcaagacggttttggccct
gacaagtggaggcctgtttcagttaaggctgagcagtgggtcgggggaggcgctcctgca
gatgcagttatcgcgggagttgctccaagggtttatgatctcttggttcctgaagggttt
gagcctactcaggaggagcaacttagtagcttcgatccaaaggccggaaagagggcagta
gtgaaaatgattccagtgaaggcaaagacaaacgtaatcgttgatatgaaagatatcgaa
ggcgatgaccacgggcctggaacctacacttatgctacggacaaagtgttcgttgagcat
cacctagacctattgaggtttaggatgctagacacgggggatacttacaccttagagttt
tacttcaaggagcttggggacaatccatggaatgctccttacggattcagtcttcagata
atagaagtatacttggactttaaagagggaggtaatacttccgcgatcaagatgttccca
gatggaccaggcagtaacgttgacttagacccagaacatccctgggacgttgcattaaga
attgccggttgggactatggaaatatcatcgtcccagcgaacgggactgtgtacacggga
gaaatgaaaatatcggcggatcctattaagaacgcaataatcgttgaagttccgaagaaa
ttcataagccttgacaagaattatggcctttatggtgccgtattagttggatcccaggat
ggctttgggccagataaatggagacctgtttcagttaaggcggaacaatgggtaggagga
ggagcttctgctgaggcagtgatagctggcgtggctccaagggtttatgatcttttggtt
cctcaaggatttaggcctactcaggaggagcaacttagtagctttgatccaaaggccgga
aagagggcaatagtgaaaatgattcctctatggagcgtgcctaaggaggagaagccctca
caaactgggaccactacaacaagaacgcccacaaaaacgtcaactcccactccagaaaaa
acgaccccaaaaacaacgaagactaaaactgagaccaaagagtcaccatcaccatcccaa
acccctccatcagcaggagcacctccttcaggggaagaaagaacaacgcaaaagactggt
ggaatatgtggcccagcgtttgttctagtcatagtggccatcgtggcaattgccagaaaa
cgtttttag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-PAB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (8)   
   PROSITE (1)   
All databases (18)

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