KEGG P.abyssi: PAB0212

Pyrococcus abyssi: PAB0212

Entry

PAB0212 CDS P.abyssi

Gene name soxA

Definition sarcosine oxidase, subunit alpha

Orthology K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]

Pathway pab00260 Glycine, serine and threonine metabolism
pab01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:pab00260]

SSDB

Motif Pfam: Pyr_redox_2 FAD_binding_2 HI0933_like Pyr_redox DAO Thi4
FAD_binding_3 GIDA Lycopene_cycl AlaDh_PNT_C ApbA 3HCDH_N
TrkA_N NAD_Gly3P_dh_N ELFV_dehydrog CPSase_L_chain
F420_oxidored Shikimate_DH UDPG_MGDP_dh_N DHODB_Fe-S_bind
Trp_halogenase
PROSITE: 2FE2S_FER_1 2FE2S_FER_2

Other DBs NCBI-GI: 14520528
NCBI-GeneID: 1495202
IGM_Orsay: PAB0212
UniProt: Q9V1W4

Position 319064..320509

AA seq 481 aa
MDIVRIKEHPILNFESKRGRKVTIYYKGKPIEAYEGETIAAALHAAGIKVLNYSRIKKRP
RGLFCAIGKCSSCLMTVNGIPNVRTCITLVEDGMRIEENAPRLPKELKELKKRNVRRVKS
DIIVIGGGPAGMMAAISAHDAGAKVVLIDENPMLGGQLVKQTHKFFGKRSQFAGVRGVKI
AEILENEVKKRNIEVFLQTSAVGIFQDGNEKIVVGIRKESELIELHGRAIIVATGAMEKS
VPFENNDLPGIYGAGAIQTLMNTYGVKPGEKALIVGAGNVGLILAYQLIQAGVKVEAIVE
AMPKIGGYFVHAAKVRRLGVPILTRHTILRAEGKEKVERAIVAQIDENWRPIPGTEKIFD
VDLIAIAVGLRPSIELLQQAGCQIRYVRELGGHVAVRDEWLETTVRGIFVAGDTAGIEEA
TTAMLEGKIAGIAAALRLGIASESLVKEIEKTERELEEFRSGPFGKHIVEGIRKLLSEVS
K

NT seq 1446 nt +upstreamnt +downstreamnt
gtggatatcgtgagaattaaggaacaccctattctgaactttgagagtaagagagggagg
aaagtcacaatctactataaaggaaaaccgattgaggcctatgaaggggagacgattgcg
gcagcgcttcatgctgccggaataaaagtacttaattattcaagaatcaagaaacgacca
agggggttgttctgtgcaataggaaaatgctcttcttgcctcatgaccgtcaatggaatt
ccaaacgttagaacatgcattaccctcgtagaagatggaatgaggatagaggaaaacgcg
ccaaggctccctaaagaactcaaggagctcaaaaagagaaatgtgcggagagttaaaagt
gatataatagtgattgggggcggtccagccggcatgatggccgctataagcgcccatgat
gccggagcaaaggtcgttttaatagatgaaaacccaatgcttggaggacaactggtcaag
cagactcacaagttctttggaaagagaagtcaattcgctggagttaggggagtgaaaata
gctgaaatactcgaaaatgaagttaaaaagaggaacatagaagtgttcttgcaaacctcc
gccgtcggcatattccaggatgggaatgagaaaattgttgttggtattaggaaagaaagc
gagctaatagaactccatggaagggccattatagtggcgacaggggccatggaaaagagc
gttccatttgagaataatgacctgccaggaatatatggggctggagcaatccaaacccta
atgaacacctatggagtgaaaccaggagagaaggcattaatagtaggcgctggaaacgtc
ggcttgatactagcgtatcaacttattcaagctggggttaaggtggaagcaatagtcgag
gcgatgccgaagattggaggctactttgttcacgcagccaaagttaggagattgggggtt
ccaatactaactagacataccattctcagggcggaggggaaggaaaaagttgagagagct
atcgttgctcagatagatgaaaactggaggccaattcctgggaccgagaaaatcttcgat
gttgatcttatagctatagccgtgggacttagaccgagcatagagcttctccaacaggct
ggatgccaaataagatacgtcagggaacttggcgggcatgtggctgttagagatgagtgg
ttggaaacgacggtgaggggaatattcgtcgctggggatacagcggggatagaagaagcg
accaccgctatgttggagggtaaaattgccggaattgcagctgcactaaggttggggata
gccagtgaatctttggttaaggaaatagaaaagactgagagagagctcgaagaattccgt
tctggaccttttgggaagcatattgttgaggggattaggaagctcctctcggaggtgtct
aaatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-PAB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (23)   
   Pfam (21)   
   PROSITE (2)   
All databases (36)

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