KEGG P.abyssi: PAB0214

Pyrococcus abyssi: PAB0214

Entry

PAB0214 CDS P.abyssi

Gene name soxB

Definition sarcosine oxidase, subunit beta

Orthology K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]

Pathway pab00260 Glycine, serine and threonine metabolism
pab01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:pab00260]

SSDB

Motif Pfam: DAO Pyr_redox_2 FAD_binding_2 Pyr_redox Phage_XkdX HI0933_like
GIDA UDPG_MGDP_dh_N FAD_binding_3 Thi4 F420_oxidored 3HCDH_N
ApbA

Other DBs NCBI-GI: 14520531
NCBI-GeneID: 1495205
IGM_Orsay: PAB0214
UniProt: Q9V1W1

Position 321272..322411

AA seq 379 aa
MIGVIGGGIIGVATAYELAKLGEEVVVFEKRYFGSGSTFRCASGIRAQFTDEANIKLMKY
SIERWKELSEELGHNIMFQQTGYLFLATTEEEVEAFKKNIKLQNRFGVPTKLITPEEAKE
IVPPLNVEEFLAGAWNPEDGKASPFHTLYAYKKAGEKLGVKFYPYTEVVWIDGGREHKWK
IKTTKGEFEVDVIVNATNAWGSRINSMIGKDIVPITPFKHQLVKTEPLERGQIEPLVCPP
AWNDSYVIQDGEDGGVICGTALEYKSDPDDVTPTYDFVKEVLKWAVKIIPALRHVHVVRQ
WAGHYAKTPDNNPAIGELVEDFYVAIGFSGHGFMMAPAVAQALAERIVKGRTKVPLDWEW
YDPYRFERGELRTSAFQIG

NT seq 1140 nt +upstreamnt +downstreamnt
atgattggggtcattggaggaggaataattggagttgcaactgcctatgaactcgcaaag
cttggagaggaagtggtggtgttcgagaaaagatactttggctcaggttcaactttcaga
tgtgcaagtggcattagggctcaatttaccgatgaagctaatataaagctaatgaagtat
tcaattgaaaggtggaaagagctgagcgaagagctcgggcataatataatgttccagcag
acgggttacttattcttggcgactacggaggaggaagttgaagctttcaagaaaaatata
aagcttcaaaacagatttggagttcctactaagctaattactcccgaggaagctaaagaa
atagttcctcctcttaacgtggaagaattccttgctggcgcttggaatccagaagatggt
aaggctagccccttccatacgttatacgcttacaaaaaagcaggagagaagctgggggtc
aagttctatccatatacagaagttgtttggatagatgggggtagggaacataagtggaag
ataaaaactacgaagggtgagtttgaggtcgatgtcatagttaacgccacgaacgcctgg
ggcagtagaattaattcgatgataggaaaggacatcgttccgataactccctttaagcat
caactggtcaaaacagaaccgctggaacggggtcagatagagcccttagtgtgccctccg
gcgtggaatgatagttatgtaatccaggatggtgaggacggtggggttatatgtggaaca
gcgttagagtataagagcgatccagacgatgttactcccacttatgacttcgttaaggaa
gttctaaaatgggcagtcaagataatcccagcccttaggcacgttcatgtagttaggcag
tgggccggacattacgctaaaactccggacaataatcccgctataggtgaacttgttgaa
gacttttacgtggctataggcttctcgggccatgggttcatgatggcaccggccgttgcc
caggctttagcggagaggatagtaaaaggaagaacgaaagtcccattggactgggagtgg
tacgacccatacaggtttgagaggggagaattaaggacgtcggcatttcagataggttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-PAB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)

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