KEGG P.abyssi: PAB0286

Pyrococcus abyssi: PAB0286

Entry

PAB0286 CDS P.abyssi

Gene name aksA

Definition trans-homoaconitate synthase

Orthology K01649 2-isopropylmalate synthase [EC:2.3.3.13]

Pathway pab00290 Valine, leucine and isoleucine biosynthesis
pab00620 Pyruvate metabolism
pab01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:pab00620]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
biosynthesis [PATH:pab00290]

SSDB

Motif Pfam: HMGL-like AP_endonuc_2
PROSITE: AIPM_HOMOCIT_SYNTH_2 PYR_CT

Other DBs NCBI-GI: 14520652
NCBI-GeneID: 1495330
IGM_Orsay: PAB0286
UniProt: Q9V1J1

Position 419656..420741

AA seq 361 aa
MVLDSTLREGEQTPGVNYTPEQRLEIAIALDEVGVDFIEIGHPAVSEDVFRGMKLIAEQG
LNVELLAHSRALIEDIDYVLKTGVDWVGIFFCLSEACLRKRFRITLDHALEKISRAIEYA
KDHGLKVRFTPEDTTRTEWANLKRAIRLAKELKVDRISVADTTGSTHPLRFYTLVKKIVN
FGIPVNVHCHNDLGLALANAIMGIEAGATLVDATVNGLGERAGIVDLAQIITVLYYHYGI
KKYRLDLLYRVSNLVSEITGISPQPNYPIVGENAFTHKAGLHVSAVLKDPRFYEFLPAEV
FGRERTIYVDRYAGKDTIRYYLEKFGIRDHGIVTSLLRKVKSSREPFTWEKLLEEARRVK
E

NT seq 1086 nt +upstreamnt +downstreamnt
atggtgctagactcaactttgagagaaggagagcaaactccaggagttaattacacccca
gaacagagacttgaaatagcaatagccctagatgaggttggagttgacttcatagagatt
ggacatccagcggttagcgaagatgtattcagagggatgaaattaatagcggagcagggg
ttaaatgttgagttactagctcattcaagagcgctaatagaggacattgattatgttcta
aagactggagtcgattgggtgggaatattcttctgtctatcggaggcttgccttaggaag
aggttcagaataacgttagaccatgcccttgaaaagatatctagggccattgagtacgca
aaagaccatggacttaaggttcgctttacacccgaagacaccactaggactgaatgggcg
aacttgaagagggctataaggcttgcaaaggagttaaaagttgataggataagcgttgct
gacaccactggaagcacgcatccgctgaggttctacactctcgtcaagaaaattgtcaac
tttggaatacccgttaacgttcactgtcacaacgatctcgggttagcactagcaaatgcg
attatgggaatagaggctggagcaactctcgtggatgctaccgttaacggtcttggggag
agggctggaatagttgacttggctcaaataataacggtgctctactatcactatggaatc
aaaaagtacaggctggatctcctctacagggtaagcaacctagttagcgagataactgga
atatcgccccaacctaactatccaatagttggtgagaacgcattcacgcataaggctggt
ttgcacgtttcagcggtgcttaaggatccaaggttctacgagttcttgcccgctgaggtt
ttcggaagggagagaacgatatacgtcgataggtacgccggtaaggatacgataaggtac
tacctcgagaaattcggaataagagatcatggaattgtgacatctcttcttaggaaggtt
aagagcagcagagaacctttcacctgggaaaagttgttagaagaggctaggagggttaaa
gaatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-PAB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (2)   
   PROSITE (2)   
All databases (18)

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