KEGG   Pyrococcus abyssi: PAB0425Help
Entry
PAB0425           CDS       P.abyssi                               
Gene name rpoA2
Definition DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
Orthology K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Pathway pab00230  Purine metabolism
pab00240  Pyrimidine metabolism
pab01100  Metabolic pathways
pab03020  RNA polymerase
Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:pab00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:pab00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:pab03020]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: RNA_pol_Rpb1_5 A_deaminase Bac_DNA_binding GatB_Yqey
Motif
Other DBs NCBI-GI: 14520832
NCBI-GeneID: 1495521
IGM_Orsay: PAB0425
UniProt: Q9V113
Position 585624..586817 Genome map
AA seq 397 aa AA seqDB search
MVSSSTIKSLIEKKGKDLPESVKQELYEKLIKYNEKYKLTKAEVETIIDEVVKEYERALV
EPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPMMTV
YLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLINMEFIVEIDPERLEKSGLTMEKV
LKKLQSSFKSAEFEMEGYTLIVRPKKFEKISDLRRLAEKVKKHRLKGLSGVGKTIVRKEG
DEYVIYTEGSNFKQVLKVPGVDPTRTKTNNIHEIAEVLGIEAARNAIIEEIMNTMREQGL
EVDIRHIMLVADIMTLDGVVRPIGRHGVVGEKASVLARAAFEITVQHLFEAAERGEVDNL
SGVIENVLIGQPVPVGTGMVKLTMKLPLRPQKEKEEV
NT seq 1194 nt NT seq  +upstreamnt  +downstreamnt
atggtttcttcctctacaattaaatctttgattgagaagaagggtaaggatcttcccgag
agcgtgaagcaggagctttatgaaaagctcatcaagtacaatgagaagtacaaactaacg
aaggccgaagttgagacgataatcgatgaggtcgttaaggagtacgaaagggctcttgtt
gagcctggagaagcagtcggaacggttgcggcccaatctataggggaaccctcaactcag
atgactctgaacactttccactatgctggtgtggctgagataaacgtaaccctaggtctt
cccaggattatagagatagtagatgcgaggaagaacccctcaacaccaatgatgaccgtt
tacttagatgaggaacatcgctatgatagggagaaggccgaggaagtggcgagaaggata
gagggtacaaccctcgaaaacttggcgagaacaacgactttggacttgattaatatggag
tttatagtcgaaattgatcctgagaggctcgagaagagtggcctaacaatggagaaagtc
cttaagaagttgcagagctctttcaagagtgctgagtttgaaatggagggttatacgcta
atagttaggcctaagaaattcgagaagatctccgaccttaggaggctcgccgaaaaggtt
aaaaagcaccgtcttaagggtctctcgggcgttggaaaaaccatcgtgagaaaggaaggc
gacgaatacgtcatatacaccgagggatctaacttcaagcaggtcctgaaggttcctggg
gttgatccaacgaggactaagaccaataacatccacgagatagctgaagtgttaggaatc
gaagctgcaaggaatgcaataattgaggaaattatgaacacaatgcgtgagcagggtctt
gaggttgatataaggcatataatgctcgtcgccgatatcatgacgcttgacggtgtagtg
aggccaattggaaggcacggtgtagttggtgaaaaggcaagtgtccttgcaagggcggcc
ttcgagattaccgtccaacacctgtttgaggccgccgagaggggagaggttgacaacctt
agcggagttattgaaaacgtcctcatagggcagcccgttccagtgggaacgggcatggtt
aagttgactatgaaactaccattgagaccccagaaagagaaggaggaggtgtag
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