KEGG   Pyrococcus abyssi: PAB2048Help
Entry
PAB2048           CDS       P.abyssi                               
Gene name trpB-1
Definition tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology K01696  tryptophan synthase beta chain [EC:4.2.1.20]
Pathway pab00260  Glycine, serine and threonine metabolism
pab00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pab01100  Metabolic pathways
pab02020  Two-component system
Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:pab00260]
Metabolism; Amino Acid Metabolism; Phenylalanine, tyrosine and
tryptophan biosynthesis [PATH:pab00400]
Environmental Information Processing; Signal Transduction;
Two-component system [PATH:pab02020]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: PALP
PROSITE: TRP_SYNTHASE_BETA
Motif
Other DBs NCBI-GI: 14520675
NCBI-GeneID: 1495355
IGM_Orsay: PAB2048
UniProt: Q9V1G8
Position complement(441984..443150) Genome map
AA seq 388 aa AA seqDB search
MWFGKFGGQYVPETLMEPLRELEKAYKRLKNDEEFNRQLDYYLRTWAGRPTPLYYAERLT
KKVGGAKIYLKREDLLHGGAHKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGAL
LGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVHTGSKTLKDAINEALRDWVATFEYSH
YLIGSVVGPHPYPIIVRDFQSVIGREAREQILEAEGDLPDVIVACVGGGSNAMGIFYPFV
KDKSVRLIGVEAGGKGIESGKHSASLNAGEIGVFHGMLSYFLQDEEGQIRTTHSIAPGLD
YPGVGPEHAYLKESGRAEYVTVTDEEALRAFHELSRTEGIIPALESAHAVAYAIKLAREM
SRDDVIIVNLSGRGDKDLDIVLKVSGNV
NT seq 1167 nt NT seq  +upstreamnt  +downstreamnt
atgtggttcggtaaatttggaggtcaatacgttcctgaaacccttatggaaccgttgaga
gagcttgagaaggcttataagaggttaaagaatgacgaagaatttaacaggcaactcgat
tattacctaagaacctgggctggaagaccaactccactctactacgcagagagattaacc
aagaaagttggaggggcaaagatatacctaaagagagaagatctcctacatggaggagct
cacaagacgaataacgcaataggccaagcattacttgctaagttcatggggaaaacccgg
ttaatcgcagaaaccggagctgggcaacatggagttgcaacagcaatggctggagcattg
cttggaatgaaagttgacatatacatgggtgctgaggacgttgagaggcagaagatgaac
gttttcaggatgaaactcctgggagcaaacgtcattccagtccatacgggttctaaaacc
ctaaaggatgcaatcaacgaggctctcagagattgggtagcaaccttcgagtattcccac
tacctcataggctcggtagttggtccccatccatatccgataatagtgagggacttccag
tctgtgataggaagggaagctagggagcagatacttgaagcggaaggggatttaccagat
gtaatagttgcttgcgttggtggtgggagtaacgcgatgggtatattctatccattcgtc
aaagacaaaagcgttaggctcataggcgttgaggctgggggaaagggtatcgagagcggg
aaacactcggcatccctaaacgcaggagagattggagttttccatggaatgctcagttac
ttccttcaggatgaagagggacagataagaacaacccacagcatagcccccggattagat
tatccaggggtagggcccgagcatgcgtatctaaaggagagcggaagagctgaatacgtt
accgttacagacgaggaagctctaagagcgttccacgagttgtctaggacagaaggaatt
attccagccttggaatcagcacatgccgttgcctacgcaattaagttagccagggagatg
agtagggatgacgtgataatagtgaacctctcaggaaggggagacaaagatttagatata
gtgctcaaggtgagcgggaatgtttag
DBGET integrated database retrieval system