KEGG   Pyrococcus abyssi: PAB2048Help
Entry
PAB2048           CDS       T00024                                 

Gene name
trpB-1
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
pab  Pyrococcus abyssi
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:pab00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    PAB2048 (trpB-1)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PAB2048 (trpB-1)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    PAB2048 (trpB-1)
Enzymes [BR:pab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     PAB2048 (trpB-1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(441984..443150)
Genome map
AA seq 388 aa AA seqDB search
MWFGKFGGQYVPETLMEPLRELEKAYKRLKNDEEFNRQLDYYLRTWAGRPTPLYYAERLT
KKVGGAKIYLKREDLLHGGAHKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGAL
LGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVHTGSKTLKDAINEALRDWVATFEYSH
YLIGSVVGPHPYPIIVRDFQSVIGREAREQILEAEGDLPDVIVACVGGGSNAMGIFYPFV
KDKSVRLIGVEAGGKGIESGKHSASLNAGEIGVFHGMLSYFLQDEEGQIRTTHSIAPGLD
YPGVGPEHAYLKESGRAEYVTVTDEEALRAFHELSRTEGIIPALESAHAVAYAIKLAREM
SRDDVIIVNLSGRGDKDLDIVLKVSGNV
NT seq 1167 nt NT seq  +upstreamnt  +downstreamnt
atgtggttcggtaaatttggaggtcaatacgttcctgaaacccttatggaaccgttgaga
gagcttgagaaggcttataagaggttaaagaatgacgaagaatttaacaggcaactcgat
tattacctaagaacctgggctggaagaccaactccactctactacgcagagagattaacc
aagaaagttggaggggcaaagatatacctaaagagagaagatctcctacatggaggagct
cacaagacgaataacgcaataggccaagcattacttgctaagttcatggggaaaacccgg
ttaatcgcagaaaccggagctgggcaacatggagttgcaacagcaatggctggagcattg
cttggaatgaaagttgacatatacatgggtgctgaggacgttgagaggcagaagatgaac
gttttcaggatgaaactcctgggagcaaacgtcattccagtccatacgggttctaaaacc
ctaaaggatgcaatcaacgaggctctcagagattgggtagcaaccttcgagtattcccac
tacctcataggctcggtagttggtccccatccatatccgataatagtgagggacttccag
tctgtgataggaagggaagctagggagcagatacttgaagcggaaggggatttaccagat
gtaatagttgcttgcgttggtggtgggagtaacgcgatgggtatattctatccattcgtc
aaagacaaaagcgttaggctcataggcgttgaggctgggggaaagggtatcgagagcggg
aaacactcggcatccctaaacgcaggagagattggagttttccatggaatgctcagttac
ttccttcaggatgaagagggacagataagaacaacccacagcatagcccccggattagat
tatccaggggtagggcccgagcatgcgtatctaaaggagagcggaagagctgaatacgtt
accgttacagacgaggaagctctaagagcgttccacgagttgtctaggacagaaggaatt
attccagccttggaatcagcacatgccgttgcctacgcaattaagttagccagggagatg
agtagggatgacgtgataatagtgaacctctcaggaaggggagacaaagatttagatata
gtgctcaaggtgagcgggaatgtttag

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