KEGG P.abyssi: PAB2266

Pyrococcus abyssi: PAB2266

Entry

PAB2266 CDS P.abyssi

Definition DNA polymerase II small subunit (EC:2.7.7.7)

Orthology K02323 DNA polymerase II small subunit [EC:2.7.7.7]

Pathway pab00230 Purine metabolism
pab00240 Pyrimidine metabolism
pab01100 Metabolic pathways

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:pab00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:pab00240]
Genetic Information Processing; Replication and Repair; DNA
replication proteins

SSDB

Motif Pfam: DNA_pol_E_B tRNA_anti Metallophos
PROSITE: GLU_RICH

Other DBs NCBI-GI: 14520339
NCBI-GeneID: 1495008
IGM_Orsay: PAB2266
UniProt: Q9V2F3

Position complement(119543..121402)

AA seq 619 aa
MDELVKALERAGYLLTPSAYYLLVDHFKEGKFSLVELVKFAKSKGVFIIDGDLAYEFLQF
LGLGVPQEIKESYISTGEEAEKTVESQETRASELEEGGVSQVSSGELQELKEESPEISTT
EEEIGGLELVQSSISTGSEVEYNNGENGESVVVLDKYGYPILYAPEEIGEEKEYSKYEDV
VIEWNPSVTPVQIEKNYEVKFDVRQVKLRPPKVKNGSGKEGEIIVEAYASLFKSRLSKLK
RILRENPEISNVVDIGKLNYVSGDEEVTIIGLVNSKRETNRGLIFEVEDKTGIVKVFLPK
DSEDYREAFKVLPDAVVAFKGFYSKKGIFFANKFYLPDVPLYRKQKPPLEEKVYAILISD
IHVGSREFCEKAFLKFLEWLNGHVESKEEEEIVSRVKYLIIAGDVVDGIGIYPGQYSDLV
IPDIFDQYEALANLLANVPEHITMFIGPGNHDAARPAIPQPEFYKEYAKPIYKLKNAIII
SNPAVIRLHGRDFLIAHGRGIEDVVSFVPGLTHHKPGLPMVELLKMRHLAPTFGGKVPIA
PDPEDLLVIEEVPDLVQMGHVHVYDAVVYRGVQLVNSATWQAQTEFQKMVNIVPTPAKVP
VVDVESARVVKVLDFSGWC

NT seq 1860 nt +upstreamnt +downstreamnt
atggatgaattggttaaggcccttgagagggccggctacctcttaacgccttcggcctac
tatctcctcgtggatcattttaaggagggtaagttctccctagttgagctcgtgaagttt
gcaaaatccaagggcgtcttcataatagatggcgacctagcttacgagttccttcaattc
ctgggcctcggggttccacaggaaataaaggagagttatatttccactggagaagaggct
gagaaaacagttgaatcccaggaaactagagcttcagagcttgaagaagggggagtaagt
caagtttctagtggagagctccaggaattgaaggaagaatctcctgaaatttccacaact
gaggaagaaattggaggtcttgaactggtccagagttctatttccactggaagtgaagta
gagtataacaacggtgaaaatggagagagcgtggttgtgctcgataaatacggttatcca
attctatatgctccagaggaaataggggaggagaaggagtactcaaagtacgaggacgtt
gtaatagagtggaatccatcagttacaccagttcaaatagagaagaattatgaggtaaaa
tttgacgtgaggcaagtgaagttgaggcctccaaaggttaagaatggttcgggaaaagaa
ggggagataatagttgaggcctatgcatccctgttcaagagcaggctatctaagcttaag
aggattctccgtgagaatcccgagataagcaacgtggtcgatatagggaagctaaattac
gtgagtggagacgaggaagttacaataattggactggttaactccaagagggaaacaaac
aggggcttgatatttgaggttgaggataaaactggaatcgtgaaggttttccttccaaag
gattctgaagattacagggaggcgtttaaagttcttccagatgcggtagttgcgtttaag
ggtttctattccaagaagggaatattctttgccaataaattctaccttccagacgttccg
ctttatagaaagcagaaacctccactggaagagaaagtctatgcgatattgataagtgat
attcacgttgggagcagggagttctgcgagaaggcgttccttaagttcctagagtggctg
aatggccacgttgagagcaaggaagaggaggaaatagttagcagggtgaagtaccttata
atagctggagacgttgttgatgggataggaatatatcctggccaatatagtgatctcgtg
attccggatatatttgaccaatacgaggccctagctaaccttttggcgaacgttccagag
catataacgatgttcatagggccaggaaatcacgatgccgctaggccagcgattcctcaa
ccagaattttacaaggaatatgcgaaacccatttacaagcttaagaacgccatcataata
agcaatccagccgtaataaggttgcatggtagggacttcttgatagctcacggaaggggg
atcgaagatgtggtatcttttgtccctgggttaacccatcacaagcctggattgccgatg
gttgagctgcttaagatgaggcatctagccccaacgttcgggggcaaggttccaattgct
ccagatcccgaggatttactcgtcatcgaggaagttcctgatttggttcagatgggtcac
gtccacgtttatgatgccgttgtttacaggggtgtccagctcgtgaattctgcaacttgg
caggcccagactgagttccagaagatggttaacatagtccctacgcctgccaaggttccc
gtggttgatgttgaaagcgcgagggttgttaaggttctcgacttcagcgggtggtgttga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-PAB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (18)

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