KEGG P.abyssi: PAB2292

Pyrococcus abyssi: PAB2292

Entry

PAB2292 CDS P.abyssi

Definition glycogen synthase

Orthology K00703 starch synthase [EC:2.4.1.21]

Pathway pab00500 Starch and sucrose metabolism
pab01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Starch and sucrose metabolism
[PATH:pab00500]

SSDB

Motif Pfam: Glycos_transf_1 Glyco_transf_5 Glycogen_syn

Other DBs NCBI-GI: 14520294
NCBI-GeneID: 1494962
IGM_Orsay: PAB2292
UniProt: Q9V2J8

Structure

PDB: 3FRO 2BIS 2BFW

Position complement(68005..69318)

AA seq 437 aa
MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEE
VQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPL
PDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPE
HTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSL
LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWA
RSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV
GGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAER
YVKAYTGSIDRAFDFIL

NT seq 1314 nt +upstreamnt +downstreamnt
atgaaggtgttattgcttggatttgagtttcttccggttaaagtgggaggccttgctgag
gcccttacggcgatatctgaggctttagcatccctcggtcatgaggttctggtatttaca
ccttcacatggaaggtttcagggtgaggaaataggtaagattagagtctttggggaagaa
gtccaggtaaaggtaagttacgaggagagagggaacctaaggatatatagaataggggga
ggtcttctcgattccgaagatgtttacggcccaggatgggatggtttaattagaaaagct
gtaacttttggaagggcaagtgttttgctattgaacgatcttcttagggaggaacccctt
ccagatgtcgttcacttccatgactggcatacggtatttgcgggggcattaataaagaag
tacttcaagatccccgcggttttcacaatacatagactgaacaaatcaaaattgccggct
ttctacttccatgaagcgggattgtctgagttggctccttatccagatatagatccagag
cacactgggggatacatagctgatatcgtgacaaccgtaagtaggggatacctaattgac
gaatggggtttctttagaaacttcgagggcaaaataacttacgtcttcaatgggattgat
tgtagcttttggaacgagtcatatttaacgggaagtagggatgagaggaagaaatccctg
ctctcaaagtttggaatggacgaaggagtaacattcatgttcattggaaggttcgatagg
ggccaaaagggcgttgatgttctattgaaggcaattgaaattctgtcatctaagaaagaa
ttccaggaaatgagatttataataattggaaagggagatcctgaacttgaaggttgggct
agaagccttgaggagaagcatggaaatgtgaaagttatcacggagatgctatcaagggaa
ttcgttagggaactttacggctctgtggatttcgttattataccatcttactttgaacca
ttcggtttagtggctttagaggcaatgtgtttgggggcgatccctatagcttcagcagtt
ggagggcttagggatatcataacgaacgaaacgggaatcctcgtgaaggctggcgatcct
ggagaattggcaaatgctatcttaaaggcccttgaactttctaggagcgatctaagtaaa
ttcagggaaaactgcaaaaagagagcaatgtcattttcctgggaaaaatcggcggagaga
tacgtaaaagcatatacaggaagtatagatagggcgtttgacttcatcctatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   IGM_ORSAY-PAB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (3)   
   Pfam (3)   
All databases (19)

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