KEGG   Candidatus Paracaedibacter acanthamoebae: ID47_11525
Entry
ID47_11525        CDS       T03232                                 
Name
(GenBank) hypothetical protein
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
paca  Candidatus Paracaedibacter acanthamoebae
Brite
KEGG Orthology (KO) [BR:paca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paca03400]
    ID47_11525
Enzymes [BR:paca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ID47_11525
DNA repair and recombination proteins [BR:paca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     ID47_11525
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 PDDEXK_1 AAA_30 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AIK97225
UniProt: A0A077B2J7
Position
complement(2358219..2361428)
AA seq 1069 aa
MIAVDANPSYPQKLAASPHVSAWVSASAGTGKTKVLTDRLLNLMLSGEDPSKILCLTFTK
AAAAEMQTRLFHRLSSWVQMDDTQLHQSLEDLWQGPVTPPLHLKARSLFTQILDLPSGIK
IQTIHGFCQTVLGRFPLEARIPAQFSILDDTTAAALLHRASAKMLHQKSQEYPDLFDLLA
LHYKDKKFEETLEDLLSHRRNLRQLSHHNLDSYNHHLKVTLDLPSHLTLLDRQAREGFIA
KASQEGTYNRAGLLACLEVKANPILERWLASSVEERVALYDQYARLFLTADGSISKRPAV
KHEVEAERIYQLNDLLNRLEIAQKSLILFVFGTAIYDHYQQQKLIESALDYDDLIEKTIN
LLNDPELAAWVLYKLDGGIDHILIDEAQDTNPAQWDVIKALTQDFFRPDKSNRTLFVVGD
SKQSIYSFQGANPHDFVRLQHFFAQQSQAIGQTWRTVDLSVSFRSTPQILNLVDSVFTDK
TLQEQVLAESNLVHTPFRQNHHGKVCLWPALIKPEDEEKGDMTPWTLPTVRIVDTGLYQQ
YAHQIAQQIDHLLHSGMILPSTKQPIQAKDILILVRQRSDFINHLIRCLKQRHIPIAGAD
RFLLTTHLAVKDLLSLGQFLLQPLDDLSLAAVLTSPLIGLSHADLMMLSMNRQGSLWMEL
IKHSESPTYQTAYEWLKEVLDKTDYLSPFELFSYVLHKLDGKKRILSRLSHEAEDVLGEF
LNLLLTLDHQISPSLELVMGEILAQGYELKRDSADTQHNEVRIMTIHGSKGLQAPVVILV
EKFNAKSPTGNILWRHTDQQCNLLLATPPKAQDIELTAVLKADHLLHEEAEDKRLLYVAL
TRAQDHLYIGGYGDKQPKDAWYSLLEDKGVVKEEWAPSVIPSTQDLPALSSVDISMLPDF
LSTTVDLSHQLKPIEDKEPTTAQAHRGILIHKLLEILPELHPSLWQEKGMQVIQGMTNDL
ALQQDCLTTTLTLLKSDNLRDFFGQDSVAELEVMTANGDLIRLDRIVLGPIIKILDYKSS
QTPPLSADQISASIKQQLKGYKQALAFLYPNTPIDCYVLWTTNGRLDQL
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgatcgctgttgatgccaatcccagttatccccaaaaacttgccgcctccccccacgtt
agcgcttgggtaagcgcctcagccggtacaggtaaaacaaaagttctgaccgatcggctc
ttaaatcttatgctcagcggcgaagatccttccaaaatcctgtgcttaacatttaccaag
gcggcagcggctgaaatgcaaacccgtcttttccaccgtctcagttcttgggtacagatg
gatgatacacagcttcatcaaagcctcgaggatttatggcagggtcctgtgacgccaccg
ctacatcttaaggcgcgcagcttattcacccagatcctggatctaccaagcggcataaaa
atccaaacaatccatggtttttgccaaacagttctgggacgatttccgttagaagccaga
attccggcacaattttcaattctggatgatacaacggccgctgccttattacaccgcgcc
agcgcaaaaatgttgcaccaaaaatcgcaagaatatcccgatctattcgatctcttagcg
cttcattataaagacaaaaaatttgaagaaaccttagaggatttactgtcccatcgccga
aacttacgccagctaagtcaccataacctggattcctataatcatcaccttaaggtaaca
cttgacctaccctctcacttaactcttctagaccgacaggcccgcgagggttttattgcc
aaggcatcgcaagagggaacgtataatcgggctggcttgttggcctgccttgaggttaaa
gcgaaccccatcttagaacgatggcttgcaagctcggttgaagagcgagttgcgctgtat
gaccaatatgccaggctttttctcacagctgacggctctatttctaaaaggccagccgtt
aaacatgaggtcgaagctgaacggatttatcaactcaatgacctgttaaaccgattagaa
attgcccaaaaatcccttatcttgtttgtttttggaacagcaatttatgaccattatcaa
cagcagaaattgattgaatcagcactcgattatgatgacttgatcgaaaagacgattaat
ctgctgaatgatccagaattggcagcctgggttctttataaactggatggtggaattgat
catatattgattgatgaggcccaggataccaaccctgcccaatgggatgtcatcaaagct
ttaacccaagattttttcaggcccgacaaatccaatcgaactttatttgtggtgggggat
tccaagcaatccatttatagttttcaaggggcaaacccccatgattttgtgcggttgcag
cacttttttgcacaacagagccaagccatcggccaaacatggcgcactgtggatttatcc
gtttccttccgatctaccccccaaattcttaatcttgttgattctgtcttcactgataaa
acgctgcaagaacaagttttggctgaatccaatctagttcacacaccattccggcaaaac
catcacggtaaagtttgtttatggccagcccttattaaaccagaggacgaagaaaaaggt
gatatgacgccgtggacactgcccactgttagaatagttgataccggcctttaccaacaa
tacgctcaccaaatagcgcagcaaattgatcacttgctccacagcggcatgatcttacca
tccacaaagcagcctattcaagccaaagacattctaattcttgtgcgacaacgatcggac
tttattaaccatcttattcggtgcctcaaacagcgccacatccccattgccggtgccgat
cgttttttactgaccactcatttagccgtcaaagatttgttgagcttaggtcaattttta
cttcaacccctcgatgacctctctctagccgccgtgttgaccagtccgctaattgggtta
agtcatgccgacctcatgatgctgtcaatgaaccgtcaaggctccctatggatggaattg
atcaagcacagtgagtcgcccacttatcaaactgcctatgagtggttaaaggaagtttta
gataagacagattacctatcaccctttgaattattctcttatgttctgcataagctcgat
ggcaaaaaacgtattctcagccgattgtcgcatgaagccgaagatgtgttgggtgagttt
ttaaatctcttgctaacgctcgaccatcaaatcagccccagtttagaattggttatgggg
gaaattttggcacaaggctatgaactcaaaagggatagtgctgacactcaacataatgaa
gtccgcatcatgacaattcatgggtcaaagggacttcaggcgcccgttgttattctagtc
gaaaaatttaatgcgaaaagtccgacaggcaatatattgtggcgccacactgatcaacag
tgtaacttactcttagccacccccccaaaagcgcaagatatagagcttacggcggtctta
aaagctgaccacctattgcacgaagaagctgaagataaacggttgctatacgtggctctg
actcgcgctcaagatcatctctatatagggggatatggcgacaaacaacccaaagatgct
tggtatagtcttctagaggataagggagtggtaaaagaagaatgggccccttctgtaatt
ccctccacccaagacttaccagccctttcatcagtcgatatttcgatgttacctgacttt
ttaagcacgactgtggatttaagtcatcaactcaaaccgattgaggataaagagccgacg
acggctcaagcccaccgcggcattcttattcataaattactcgaaatcttgccagagctt
catccatccttatggcaagagaaggggatgcaagtgatacaaggtatgaccaacgattta
gctctccagcaagattgtctgacaacgactttaaccctcctaaaatctgataatttgcga
gatttttttggtcaggattcagtagcagaacttgaagtgatgacagcaaacggtgattta
atacgccttgatcggattgtgctcggacctatcattaagatcttggattataaatcctct
cagacgccccctctttcagccgatcaaatttctgcctctattaagcagcaattaaagggg
tataagcaagctcttgcctttctctatcctaacactccgatagactgttatgttctgtgg
acaaccaatggacgattggatcagctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system