KEGG   Cutibacterium acnes HL096PA1: PAGK_1003
Entry
PAGK_1003         CDS       T02638                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pach  Cutibacterium acnes HL096PA1
Pathway
pach03030  DNA replication
pach03430  Mismatch repair
pach03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pach00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAGK_1003
   03430 Mismatch repair
    PAGK_1003
   03440 Homologous recombination
    PAGK_1003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pach03032]
    PAGK_1003
   03400 DNA repair and recombination proteins [BR:pach03400]
    PAGK_1003
Enzymes [BR:pach01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PAGK_1003
DNA replication proteins [BR:pach03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PAGK_1003
DNA repair and recombination proteins [BR:pach03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PAGK_1003
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AGJ79846
Position
complement(1123179..1126751)
AA seq 1190 aa
MARSDFVHLHTHTEYSMLDGAASNEKLFAEVARQGMPAVAMTDHGNMFGAYEFFQISKKY
DGDQNPLIKPIIGIEAYVAPSTRKSRVQEFWGTSRDAGDPDAEGGKDVSGGGRYTHMTMW
AKDSEGLHNLFRLSSLASYEGYYMKPRMDRELMGQYSGGIIASTGCPSGEVQTRLRLGQF
EEACQAASDYRDIFGRENYFCELMDHGVPIEKQVRSDLLKLAKKLDIPLLVTNDSHYVTE
DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKSSEQMRALFPDHPEACDNTLLLTEMI
GSYDEVFKYVDRMPQFDVPEGETQESWLRKKLQEGLDEKFGPNPPKEVLERLETELSVIE
PLGFSSYFLVVSDICNAARSMGVPVGPGRGSAAGSLVAYLTGIIAINPLEHGLLFERFLN
PERVNPPDIDLDFDDRQRDKVIDYVTHKYGAEYTSQVNTFGKIKAKAAVKDANRILGYPF
ALGDKITKAMPPDVMGKGVPLDKIFDSSHERYGEGQEFRQLVADNPDVAKVVETAKGLEG
LIRGTGVHACAFILSSTPLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG
IMDHCIKIIKANRGIDVDLKNIALDDKTTYEMLARGDTLGVFQLDGTAMRSLLRLMGPTC
FDDIVAVLALYRPGPMGANAHISYAQRKNNREPIIPIHPELKEDLDEILAPTYHLIVYQE
QIMSIARKLAGYTLGGADLLRRAMGKKKKHILEENFIPFQAGMREHGYSDDAIQTLWDVM
VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMAMYLADMRAQH
INVLPPDVNASSLEFTAVGEDIRFGLGAIRNVGANAVAEIIRAREENGPAPDFFTFLDQV
SLTVCNKRLIESLIKAGAFDSMGHSRRGLMAVYGQAVDAVIDIKRNQANGQDDLFGMGDD
SQPTQMGVERVVPDDDWDRSTKLAFEREMLGLYVSDHPLRGLEAALEAESDISVAELVNP
EGHHEGRYTVVGMVTQIVRRTTKNGDIWASVTLEDLDASITIACFPKVYQRVEPLLAVDS
ILKVRGFVRERDETVEMSANDIWLLDLTDASKAPMTIDMRRGRCTRGTLEELRGVLRNHP
GSSEVRLRLIDGKVTTTFRLADELKVTQGQPLMADLKALLGPSCVPRRQQ
NT seq 3573 nt   +upstreamnt  +downstreamnt
gtggcccgttccgacttcgtccacctccacacccacaccgaatactcgatgctggacggc
gctgccagcaacgagaaacttttcgccgaggtggcacgtcaagggatgcctgcggtcgcg
atgaccgaccacggaaatatgttcggtgcctacgagttcttccagatttccaagaagtac
gacggggaccagaatcctctcattaagccgatcattggtatcgaggcgtacgtcgctccg
agcacccgcaagtcacgagtacaggaattctgggggacctctcgtgatgcaggagatccg
gatgccgagggcggcaaagacgtctctggcggcggtcggtacacccatatgacgatgtgg
gcgaaggattccgaaggcctgcacaaccttttccgactctcgtccttggcgtcctatgag
ggctactacatgaaaccgcgtatggatcgcgagctcatgggccagtactccggtggcatc
atcgcctcgaccggttgcccatcgggtgaggtgcagacccggctgcgcctcggccagttt
gaggaagcttgccaagctgcatccgattatcgggacatctttggccgtgaaaactatttt
tgtgagttgatggaccacggcgtcccgatcgaaaagcaggtgaggtccgacctgctgaag
ctggccaaaaaactagacattccgttgctggtcaccaacgactcccactacgtcactgag
gatcaggccgacgcccacgactctttgctgtgtgtcggtgtgggccgaaacaaagacgat
ccgaaccggttccggttcaacggttccggctactacatcaaatcctcggagcagatgcgg
gcgctgttccccgaccatccggaggcctgtgacaacaccttgctgctgaccgagatgatt
ggctcctacgacgaggtgtttaagtacgtcgaccggatgccgcagttcgatgttcctgag
ggggagactcaggagtcctggctgcgtaagaaactccaggaaggactcgacgagaaattc
ggtccgaacccgcccaaagaggtcctagagcgtctcgagaccgagctgtcggtcatcgaa
ccgctgggattctcctcgtacttcctcgttgtctccgatatttgcaacgcggcacgttcg
atgggggtaccggtagggcccggacgtggttcagcggctggttccctggtcgcctaccta
accggcattatcgcgatcaacccgctagaacacggtctactgttcgagaggttcctcaac
ccggagcgcgtcaatccacccgatatcgaccttgacttcgacgatcgtcagcgtgacaag
gtcattgattacgtcacgcacaagtacggggctgagtacaccagccaggtcaacaccttc
ggcaagattaaggcgaaggccgctgtcaaagacgctaaccgtattctcggctatcccttc
gccctcggcgacaagatcaccaaggcaatgcccccggacgtgatgggcaagggcgttcca
ctggacaagatcttcgactcctcccacgagaggtatggcgaaggccaggagttccgtcag
ctggtggcagataaccctgacgtagccaaggttgttgagactgccaaaggcctcgagggg
ctgattcgaggcaccggcgtgcacgcctgcgcgttcatcctgtcgagtaccccactgctt
gacctcgtgccgatgcacaagcgcgataaggatggcatgatcattgccggcttcgcgtac
ccccagctcgaggagatggggctcatgaagatggacttcctgggcctgcgcaacctcggt
atcatggatcattgcatcaagatcatcaaggccaaccgggggattgatgtcgatctcaaa
aacatcgcccttgatgacaagacaacctacgagatgctggcgcgcggcgacaccctaggc
gtcttccagcttgatggcacggccatgaggtcgttgctgcggctcatgggtccgacatgc
ttcgacgacattgttgccgtgctagccctgtatcgcccgggccctatgggcgctaatgcg
catatctcttatgctcagcgtaagaacaaccgggaaccgatcattccgatccatcccgaa
ctcaaggaagacctcgacgagatccttgctcccacgtaccacctcattgtgtaccaggag
cagatcatgtcgatcgcccgaaaacttgccgggtacaccctgggtggcgccgacctgttg
cgccgagcgatgggtaagaaaaagaagcacatcctggaggaaaacttcatccccttccag
gcgggtatgcgtgaacacggttactccgacgatgccatccagactttgtgggacgtcatg
gtccccttcgctggatacgcctttaacaaatcccacgctgctggctatggacttgtctcg
tattggacggcttacctcaaggccaactacccggctgaatacggcgctgctctgctgacg
agcgtcggtgacgataaagacaagatggcaatgtacctagccgacatgcgcgcccagcac
atcaacgtccttcctcccgacgtcaacgcatcctcccttgagttcaccgctgtcggtgag
gacattcggttcggcctgggggccatccgaaatgtcggggccaatgccgtagctgagatt
attcgcgcccgggaggagaacggtccagcccccgatttcttcaccttcctcgatcaggtc
agcttgacagtatgcaataagagactcattgagtccctcattaaggctggcgctttcgac
tctatgggtcactctcgacgtgggctcatggctgtctacgggcaggccgtcgacgccgtc
atcgacatcaagcgcaaccaagccaacggtcaagacgatctattcggcatgggggatgat
tcccagcccactcagatgggggtcgagagggtcgttcccgacgacgattgggatcgcagt
accaaactcgccttcgagcgcgagatgctcggtctctatgtgtcggaccacccgctgcgt
gggctcgaggctgctctggaggctgaatcagatatttcggtggcggaactcgttaatcct
gagggccatcacgagggccggtacaccgtggtcggcatggtcacccagatcgtgcggcgt
acgactaagaacggtgacatttgggcctcagtgaccctggaggaccttgatgcgtccatc
accatcgcctgtttcccaaaggtttatcaacgagtggaacccttgctagcggtggacagc
atcctgaaggtacgcggcttcgtccgggaacgcgatgagacggttgaaatgtcggccaac
gacatctggttgcttgatctcactgacgctagcaaggcaccaatgacgatcgatatgcgt
cgcggacgctgcacccgtggcacgctcgaagagctgcgcggggtgctgcgcaaccatccg
ggtagttccgaggtgaggttgcggctcattgacggcaaagtgacaacaacattccggctt
gccgacgaacttaaggtcacccaaggtcagccgctcatggcagacctcaaggctttgctt
ggcccgtcgtgcgtcccgaggaggcagcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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