KEGG   Pediococcus acidilactici: A4V11_02615
Entry
A4V11_02615       CDS       T04512                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
paci  Pediococcus acidilactici
Pathway
paci03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4V11_02615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paci03400]
    A4V11_02615
DNA repair and recombination proteins [BR:paci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4V11_02615
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH_2 HHH 5_3_exonuc GIY_YIG_2 RE_Eco29kI
Other DBs
NCBI-ProteinID: AOW73974
Position
complement(554016..555800)
AA seq 594 aa
MASEHIEHKLALLPDKPGCYQMKNLNSQIIYVGKAKNLKNRVRSYFKSSHEGKTAKLVSE
IADFDYIVTASDKEAFLLEITLIKKYQPYYNIKLKKGTGYPYIKITNEKDPRMQIVSNVR
RDGGYYFGPYPNVYAAEETLHFLEKVYPLRRCNGYQGRPCLYYHMGQCLGACFKEVPKEE
YDQQIAKIKSFLRGNVAKVKKSLQAKMQQASEAMEFERAAEIRDQIHYIEVTVEKQRIIS
NDRTPRDLFNFYLDKGWLSIQIFFIRQSRLMKREKRLFPIASDAADEFSSFILQFYNNKN
KVLPNEILVPEGLDNQIISEILGAPVRTPKRGEKRDLMNLARENAQITLEEKFRLLELDE
SKTVGAMKEITDALGIPEGHRIEAFDHSHIQGADLVSAMVVFTDGKPDKKMYRKFKLNTV
DHADEAASTREVIRRRYVRLLKEHQSLPDLILMDGGDVQLNAARDVLVNELSLHIPVAGM
VKNDKHKTADLIFGDQDQRVQLDPKSQGFYLVQRIQDEVHRFAITFHRQMHAKNSLSSQL
DSINGVGPKTRNKLLREFGSLNKIRDAKIEEIEALGISAKVAKTIKISLSAVKR
NT seq 1785 nt   +upstreamnt  +downstreamnt
ttggcgtcagagcatattgagcataaattggctttgttaccggacaaacccggctgttac
cagatgaaaaatttgaatagtcaaattatttacgtcggtaaggcgaagaatctaaaaaac
cgggtgcgctcgtactttaaaagcagtcatgaaggtaaaacggctaaattagtaagtgaa
attgctgatttcgactacatcgtcaccgccagtgataaggaagcatttttactagaaatt
acgttaatcaagaagtaccagccctattacaacatcaagttgaaaaagggaaccggatat
ccttacattaaaattacaaatgaaaaggatccgcggatgcaaattgtttctaacgtccgg
cgtgatgggggatactactttggaccgtacccgaatgtttacgcagctgaagaaacgctt
cattttttagaaaaggtttatcccttacggcgttgtaatggatatcaaggacggccctgt
ctgtactaccacatggggcaatgcctgggggcctgctttaaagaggttcctaaagaagaa
tatgaccaacagattgctaaaattaagtcctttttgcgagggaacgttgctaaggttaaa
aagtcgttgcaggcaaaaatgcaacaagcttctgaggcaatggaatttgaacgggcagct
gaaattagggatcagattcactacattgaagttaccgttgaaaagcagcggatcatttct
aacgaccgcacccccagggacctgttcaacttttatttggataagggatggttatccatt
cagattttcttcatccgtcaatcccggttgatgaagcgcgagaaacggttgtttccaatt
gcttcggatgcggctgacgaattttcttcgttcattttgcaattttacaataataaaaat
aaagtgttgcctaatgaaattttggtaccagaaggattggacaatcaaattattagcgaa
attctaggagcaccggtccgtacgcctaaacgaggggaaaagcgggacttaatgaatttg
gctcgcgagaatgcccaaattacgttagaagaaaagttccgtttgttagagcttgacgaa
agcaaaaccgtgggagccatgaaggaaattaccgatgccctgggaatccccgagggtcac
cggatcgaggcttttgaccattcacatattcaaggagccgatttagtttcggcgatggtg
gtctttaccgacggcaaacccgacaagaagatgtatcgcaagtttaagctgaatactgtt
gatcacgcggatgaagctgccagtacccgggaggtaattcggcgtcggtatgttagacta
ttaaaggaacaccaatcgctgcctgatttgattttaatggatggcggagatgtacagtta
aatgccgcgcgcgatgtgttggtgaatgagcttagtttgcacattccggttgctggaatg
gtaaagaatgataagcataaaaccgcagatttaatctttggtgatcaagaccagcgggta
cagcttgatcctaagagtcagggattttacctagtccaacggattcaagacgaagtgcac
cggtttgcgattactttccaccggcaaatgcacgccaaaaactcgttatcatcgcaacta
gattcgattaacggggttggaccaaaaacacgtaacaagcttttacgggaatttgggtca
ctgaataagattcgggacgctaaaattgaagaaatcgaagcattgggaatctctgcgaag
gttgctaaaacgattaaaatttcgctaagtgcggtgaagcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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