KEGG   Pediococcus acidilactici: A4V11_02870
Entry
A4V11_02870       CDS       T04512                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
paci  Pediococcus acidilactici
Pathway
paci00470  D-Amino acid metabolism
paci00550  Peptidoglycan biosynthesis
paci01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:paci00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    A4V11_02870 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A4V11_02870 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:paci01011]
    A4V11_02870 (murD)
Enzymes [BR:paci01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     A4V11_02870 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:paci01011]
 Precursor biosynthesis
  Amino acid ligase
   A4V11_02870 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C AlaDh_PNT_C Mur_ligase Pyr_redox_3 2-Hacid_dh_C Shikimate_DH
Other DBs
NCBI-ProteinID: AOW74024
Position
complement(607845..609239)
AA seq 464 aa
MKALAEIKDLANKNILVLGMAKSGVSAALLLRKLNAQVLVNDAKAEQPQELIEQLKKADV
QMILGSHPKGILAQHHIELIVKNPGIPYTNPVLVAAKEQNVPIIAEPELAYRVMDSELIG
VTGSNGKTTVTTMIQLMLDQQDHHAAYVAGNIGVPATTVVQKATANDRVVMELSSFMLAG
IDQLHPHIAVVNNIFSNHLDWHKTRENYVNDKMRITENQTKDDYFVINWDNPEWQQLAQR
TAAQVVPFSRQGLVENGAYAKDGQLYFKNERIMAADEIGVPGDQNVENALAAIAVAKIEG
VANKHIKQVLQTFSGVKHRIQYVKTLAGRQFYNDSKATDIEATQVALKAFQRPIILIAGG
LDRGDDYTRLVADLKPHVKEVIVNGQTAAHMQEAAQTAGVKVVKDSPRVKNSVAIAFEDS
QPGDVILLSPAAASWDQYQTFEERGDEFITAVENLSKEKGDVTK
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaagcattagcagagataaaggatttagcaaataagaatattctcgttttggggatg
gcaaagagcggagttagtgccgctcttttgttgcgtaaactgaatgcgcaggtattagta
aatgacgcaaaagcagaacaaccgcaagaactgattgaacaacttaaaaaggctgacgtc
caaatgattttaggcagtcatccaaagggaatcttggctcagcatcatattgaattaatc
gtcaagaatcccggaatcccgtatacaaacccagttttggtagctgctaaggagcaaaac
gtgccaatcattgccgaacctgagttggcataccgggtgatggacagcgaattaattggg
gtgaccggtagtaacggaaaaacaaccgttaccacgatgattcaactaatgctagatcag
caagatcatcatgcagcatacgtggcgggaaatattggggttcctgcgactacggtagtg
caaaaagctactgctaacgaccgggtcgtaatggagctatctagctttatgctcgccggg
attgaccagttgcacccccacattgccgtggttaacaacattttctctaaccacttagat
tggcacaaaactcgggaaaattacgttaatgacaagatgaggatcacggagaaccaaacc
aaagatgattattttgtcattaactgggataatcctgaatggcaacaattagcgcaacgg
actgcggcgcaggtcgttccgttttcccgccaaggtttagttgaaaacggggcctacgcc
aaggatggtcaattatatttcaaaaatgaacggatcatggcggccgatgaaatcggggtg
cctggggaccaaaacgttgaaaatgcgctcgcggcaattgccgtggctaagattgaaggg
gttgctaataaacatattaagcaggttctccaaacttttagcggggtcaaacaccggatt
caatacgtaaaaaccttagccggccgccaattctataatgattcaaaagcaaccgacatc
gaagcaacgcaggtggctttaaaggcctttcaacggccaatcatcttgattgcgggaggt
ttagaccggggagacgactacacccgactggtggctgatttgaagccccacgttaaggaa
gtgattgttaacgggcaaactgctgcgcacatgcaggaagctgcacagacggcgggcgtt
aaagtcgttaaggacagcccgcgggttaagaattcggttgccatcgcctttgaagacagc
caacctggagacgtaattttactttcaccagctgcagcaagttgggatcaataccaaact
tttgaagaacggggcgatgaattcatcaccgccgtagaaaatttatcgaaggaaaaagga
gatgtcactaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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