KEGG T04512: A4V11

Pediococcus acidilactici: A4V11_08550

Entry

A4V11_08550       CDS       T04512

Name

(GenBank) RNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

paci Pediococcus acidilactici

Brite

KEGG Orthology (KO) [BR:paci00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paci03009]
    A4V11_08550
Enzymes [BR:paci01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     A4V11_08550
Ribosome biogenesis [BR:paci03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A4V11_08550

SSDB

Motif

Pfam:

PseudoU_synth_2 OCRL_clath_bd

Other DBs

NCBI-ProteinID:

AOW75066

Position

complement(1782131..1783045)

AA seq 304 aa
MTWTYHIKLDQSYPPQTLRELLQKTWWLSRKVVHFLRTERRVLVNQRYQPVSTVVRSGDL
ISLTFKESDFATPLPPFDPDSSQSPDVLFENDDLLVANKPAGIKTHANQPHELGSMINFL
QAYFAKKDANAYNVHRLDQWTSGALLVAKNPVVVPVLSRQISQKLIQRTYLCMVEGHLKS
RSGTITLPIGLDPHDQRKRQINGPEAQPATTHYQVVREFAERSLLLVQLATGRTHQIRVH
LAALGHPIVGDPLYNSLADGAPMRLHSWQVKFPLPFSQSWQTVTAPVPDYFGISLAEPAF
DVGD

NT seq 915 nt +upstreamnt +downstreamnt
atgacctggacgtaccatattaaactagaccaatcttaccctccccaaactttacgagaa
ctactgcaaaaaacttggtggctttctcggaaggtcgtccattttttacgcacggaacgc
cgagttttggtaaaccagcggtaccaaccggttagcaccgttgtccgtagcggagacttg
atttcgttaaccttcaaagaaagcgactttgctaccccgcttccgccatttgacccggat
tcttcccaaagtcctgacgttttgtttgaaaatgacgaccttcttgtggctaataaaccc
gcggggattaaaacgcacgctaaccaaccacacgagttgggaagcatgattaacttcttg
caggcgtactttgccaagaaagatgccaacgcatataacgttcatcgtttagatcaatgg
accagtggtgcccttttggtagccaaaaatccggttgttgtcccagtgcttagtcggcaa
atcagtcaaaaattaattcaacggacgtacttgtgcatggtagaaggtcacttgaaaagc
cgtagcggaaccatcacgcttcccattggacttgaccctcacgaccagcgtaaacgacaa
atcaacggtccggaagcgcaaccggccactactcactaccaagtggttcgtgaatttgct
gaacggagcctactactcgttcagttagcaaccggccgtacccaccaaattcgggttcac
cttgcagctttagggcatcccatcgtgggagaccctttgtataattcacttgctgacgga
gctcccatgcggctgcactcttggcaagtcaaatttcccttgccctttagccaaagctgg
caaacggtaactgcaccggtacccgattactttggaatttcgttggctgagccagctttt
gatgttggagattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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