KEGG   Pseudomonas aeruginosa PAO1: PA3622
Entry
PA3622            CDS       T00035                                 
Symbol
rpoS
Name
(RefSeq) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
pae  Pseudomonas aeruginosa PAO1
Brite
KEGG Orthology (KO) [BR:pae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pae03021]
    PA3622 (rpoS)
Transcription machinery [BR:pae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PA3622 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 KinB_sensor DUF4168
Other DBs
NCBI-GeneID: 880421
NCBI-ProteinID: NP_252312
UniProt: P45684
Structure
Position
complement(4057909..4058913)
AA seq 334 aa
MALKKEGPEFDHDDEVLLLEPGIMLDESSADEQPSPRATPKATTSFSSKQHKHIDYTRAL
DATQLYLNEIGFSPLLTPEEEVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGLS
LLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKEL
NVYLRAARELTHKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVTSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSESIDQWLTELTDKQREVVIRRFGLRGHESSTLEEVGQEI
GLTRERVRQIQVEALKRLREILEKNGLSSDALFQ
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcactcaaaaaagaagggccggagtttgaccacgatgatgaagtgctcctcctggag
cccggcatcatgctggacgagtcgtctgccgacgagcagccttctccccgggcaactcca
aaagccaccacttccttctcttccaaacaacacaagcacatcgactacacgcgcgcgttg
gacgcaacgcagctgtatctcaacgaaatcggtttctcgcccctgttgacgcccgaagag
gaagtccacttcgctcgtctggcgcagaagggcgatcccgctggtcggaagcggatgatc
gagagcaacctgcggttggtggtgaagatcgcccggcgctatgtcaatcgcggactgtcc
ctgctcgacctgatcgaggaaggcaacctaggcctgatccgcgccgtggagaagttcgat
ccggagcgcggattccggttctcgacctacgccacctggtggatccgccagaccatcgag
cgggccatcatgaaccagacccggaccattcgcttgccgatccatgtggtcaaggagctc
aacgtctacctgcgtgcggcgcgggaactgacccacaagctcgaccacgaaccttcaccc
gaagaaatcgccaacctgctggagaagccggtcgccgaggtcaagcgcatgctcggcctg
aacgaacgggtgacttcggtagacgtctctcttggtccggactcggacaagaccctgctg
gatacgctcaccgacgatcgccccaccgatccgtgcgagctgctgcaggatgacgatctc
agcgaaagcatcgaccagtggctgacggaactcaccgacaagcagcgtgaggtggtgatt
cgccgcttcggcttgcgcggtcacgaaagcagcacgctggaagaggtcggccaggaaatc
ggcctgacccgcgagcgggttcgtcagatccaggtcgaggcgctgaagcgcctgcgggag
attctggagaagaatggcctgtcgagtgacgcgctgttccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

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