KEGG T03356: R70723

Paenibacillus sp. FSL R7-0273: R70723_00030

Entry

R70723_00030      CDS       T03356

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

paea Paenibacillus sp. FSL R7-0273

Brite

KEGG Orthology (KO) [BR:paea00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paea03032]
    R70723_00030 (gyrB)
   03400 DNA repair and recombination proteins [BR:paea03400]
    R70723_00030 (gyrB)
Enzymes [BR:paea01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     R70723_00030 (gyrB)
DNA replication proteins [BR:paea03032]
Prokaryotic type
  DNA Topoisomerases
   R70723_00030 (gyrB)
DNA repair and recombination proteins [BR:paea03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      R70723_00030 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 HVO_2248 PEPcase_2

Other DBs

NCBI-ProteinID:

AIQ44482

UniProt:

A0A089K824

Position

4504..6414

AA seq 636 aa
MSMNQPTYDESQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEALAGFCDR
IQVIIHEDNSITVIDNGRGIPVGENVKLKKSTLEVVMTVLHAGGKFGGGGYKVSGGLHGV
GISVVNALSEKVVVTVKRDGHAYQQEYRRGAPQHDIKIIGDSDETGTTTTFLPDPEIFTE
TTVFEYTTLLTRIRELAFLNKGIELSLLDERTGVSNTFRYDGGIVEYVKYLNEKKEALHE
EPIYVEGSRDMIAVEVALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYAR
KTGVIKDSSNNLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFGEKLQ
QFLEENPAVSRRVLEKSLQASRAREAARKARELTRRKSALEVSALPGKLADCSSKDASIS
ELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAIITALGTGI
SDDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRKIIEAGFIYIAQPPLFKIER
NKVIRYAQTERERDEIIAGFGENVKVNVQRYKGLGEMNATQLWDTTMDPESRTMLQVTIE
DAILADGIFDTLMGDNVEPRREFIQEHAQSVRNLDV

NT seq 1911 nt +upstreamnt +downstreamnt
atgtcaatgaatcaaccgacatatgatgagagccagattcaggtgcttgaagggctggaa
gcggtccggaagcgtcccggcatgtacatcggctctaccagcgccaaaggtctgcatcat
ttggtctgggaggttgtcgataacagtatcgatgaggcgctggcaggtttttgcgaccgg
attcaagtgattattcatgaagataacagtattactgtaattgataacgggcggggtatt
cctgtcggcgagaatgtgaagctgaagaaatccacgcttgaggttgtaatgactgtcctg
catgccgggggtaagttcggcggtggcggatataaggtttccggcggtttgcacggtgta
ggtatttccgttgtaaatgcattgtccgagaaggtggtagtgactgttaagcgtgatggc
catgcctaccagcaggaatatagacgcggtgcccctcagcacgatatcaagattattggt
gattcagatgagaccggtacaactacaacattccttccggatccggagatttttacggag
acgactgtttttgaatatacaacactgcttacccgtatccgggagctggccttcctgaac
aagggaattgagctttcgctgctggatgagcggactggagtatccaacacgttcagatac
gacggcggtatcgtggagtatgtgaaatatctgaatgagaaaaaagaagcgctgcatgag
gaaccgatctacgtggaaggctcacgggatatgattgcggttgaggtagctctgcaatat
aacgattcgtatacagagaatatttattcttttgccaataacatcaatacgcatgaaggc
ggaacgcatgaatccggctttaagagtgcgctgacccggatcatcaacgattatgcccgc
aagaccggtgtaattaaggacagcagcaacaacctgaccggcgacgatgtccgtgaaggg
ctgacagcgattatctcagttaaaattcctgagccgcagtttgaggggcagaccaagact
aagcttggtaacagtgaggtccgcggaattgttgaatccctgttcggtgagaagctgcag
caattccttgaagagaaccctgcagtttcccggcgtgtactggagaagtcgctgcaggct
tcacgtgcgcgtgaagcagcccgcaaggcccgtgagctgacacgccgcaagagtgcgctt
gaagtcagcgcccttccgggtaagctggctgactgctcatctaaggatgcttccatcagt
gagctttatatcgtcgaaggggactcggccggcggatcagccaagcagggacgcgaccgt
catttccaggcgatcctgccgctgcgcggtaagattctgaacgttgagaaggcacgtctg
gaccgtattttgtccaacgccgagatccgggctattatcacggcactcggtacaggcatc
agtgatgactttgatatatccaaggcacgctaccacaaaatcgtcatcatgaccgatgcc
gatgtcgacggtgctcatatccgaaccctgctgcttaccttcttttatcggtacatgcgg
aaaattatcgaagcaggctttatctatattgcccagccgccgctcttcaagattgagcgt
aataaggtaatccgctatgcacaaaccgagagggaacgtgatgagatcattgccggcttc
ggcgagaatgtgaaggttaacgtccagcgctacaaaggacttggagagatgaatgccacg
cagctgtgggatacgacaatggaccctgagagccgcacaatgctgcaggtaaccattgag
gatgccattctggctgatggaatcttcgataccctaatgggcgataatgtagagccgcgc
cgtgaattcattcaggagcatgcgcagtccgtccgtaaccttgatgtttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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