KEGG   Paenibacillus sp. FSL R5-0345: R50345_07125
Entry
R50345_07125      CDS       T03333                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
paef  Paenibacillus sp. FSL R5-0345
Pathway
paef03030  DNA replication
paef03430  Mismatch repair
paef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    R50345_07125
   03430 Mismatch repair
    R50345_07125
   03440 Homologous recombination
    R50345_07125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paef03032]
    R50345_07125
   03400 DNA repair and recombination proteins [BR:paef03400]
    R50345_07125
Enzymes [BR:paef01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     R50345_07125
DNA replication proteins [BR:paef03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     R50345_07125
DNA repair and recombination proteins [BR:paef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     R50345_07125
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIQ34408
Position
complement(1542834..1543472)
AA seq 212 aa
MDFIAIDFETANSSRSSACALGLVEVKDGKITTEHSWLIDPKQRFDGMNISIHGITPSMV
IGQPTFDELWPTVEPLLHGQIVVAHNAAFDMSVLRYCLDGMSLSYPSFQYLCTYLLGKKM
LPELPSHKLNVVSEHFGIQLKHHDALDDARAAASVLLRLMEQESHRDPLSLSSSQGYNSG
TMFAGGYTPFSARKSKPAKRPVNKQRTNNFYL
NT seq 639 nt   +upstreamnt  +downstreamnt
atggactttatagcaattgactttgaaacggcgaattccagtcgatccagcgcctgtgct
ttaggactcgtggaagtaaaagatggaaagataacaacagaacattcttggctgatcgat
cccaagcagcggtttgacggcatgaacatttcaatacatggcatcaccccctccatggta
atcggtcaacccaccttcgatgaactgtggcctaccgttgaacctttgttgcacgggcaa
atcgtcgtggcacataatgccgcttttgatatgagtgtactgcgatattgcctcgatgga
atgtccttaagctatcctagctttcaatacttatgtacatatttattaggcaaaaaaatg
ctgcccgagctcccctctcataagcttaatgtagtctccgagcatttcggcattcagctg
aagcaccatgacgctctcgatgacgcgcgcgctgcagcctcggtactgttaagacttatg
gagcaagaatcacaccgtgatccgctttcgctctccagcagccaaggatataatagcgga
actatgtttgctggtgggtacactcctttttctgctcgaaagagtaaaccggctaagaga
cctgtgaacaaacaaagaacgaacaacttctatttgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system