KEGG   Paenibacillus sp. FSL R5-0345: R50345_14870
Entry
R50345_14870      CDS       T03333                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
paef  Paenibacillus sp. FSL R5-0345
Pathway
paef03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:paef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    R50345_14870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paef03400]
    R50345_14870
Enzymes [BR:paef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     R50345_14870
DNA repair and recombination proteins [BR:paef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     R50345_14870
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AIQ35793
Position
complement(3276880..3277755)
AA seq 291 aa
MSLLLGSHVSMTGPKMLLRASEEAASYGATTFLIYTGAPHNTRRKPIDALNIEAGQAHMK
VNGISNIVVHAPFIVNLGNTLSAQVFEHSITFLQSEIIRTEALGSTQIVLHPGSHVGAGP
QAGISRIVEGLNEVLSDKRNVQVSLETMAGKGSECGVSFEELAAIIDGVKYNERLSICLD
TCHIHDAGYNVREDFDGILDQFDRVIGIKRLKAIHINDSKNIMGSRKDRHENIGHGYIGL
QALRYVVHHPQLSTIPKLLETPSIGEKKYVNAPYKHEISLLRGETDEPIKK
NT seq 876 nt   +upstreamnt  +downstreamnt
atgtctttactcctagggtcacatgtatccatgactgggccaaagatgctccttcgagct
agtgaagaggcagcatcttatggagcgaccactttcctaatttataccggtgcccctcat
aatacacgtcgcaaacccattgatgctttgaatattgaagctggacaagctcacatgaaa
gttaacggcatttctaatattgttgtgcatgctccgtttattgttaatttaggaaatacg
ttatctgcacaggtctttgagcacagtattacgtttcttcaatcagaaattataagaacc
gaagctttaggctctacacagattgtcctccatcccggttcccatgttggtgctggccca
caggccggaatctctcggatcgttgaaggcttgaacgaagtactgtcagataaacggaat
gttcaggtttcattagaaaccatggcgggaaaaggcagtgagtgtggtgtctcttttgag
gaacttgcggctattattgatggagtgaagtacaatgagcggttgtcgatttgtttggat
acatgccatattcatgatgctggttataatgtaagagaagattttgatggcatattggat
caattcgatcgcgtaattggaataaagcgcctaaaggccattcacataaatgattcaaag
aatatcatgggctcacgaaaagaccggcacgaaaatatcggacatggatatattggcctt
caggcactgcgatatgtagtccaccatcctcaactatcgaccattcccaaactcctagag
accccctccatcggtgaaaaaaaatatgtcaatgcaccttataagcatgagatatccttg
ttaagaggagaaactgatgagcctataaaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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