KEGG   Pseudomonas aeruginosa YL84: AI22_15165
Entry
AI22_15165        CDS       T03035                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
paeg  Pseudomonas aeruginosa YL84
Brite
KEGG Orthology (KO) [BR:paeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paeg03016]
    AI22_15165
Enzymes [BR:paeg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AI22_15165
Transfer RNA biogenesis [BR:paeg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AI22_15165
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C Ribosomal_L27_C
Other DBs
NCBI-ProteinID: AHH50198
Position
3246866..3248047
AA seq 393 aa
MLAWRQALYNAPHLTKEMFVTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFY
PAAGLVQVGDGRQEWLIDPLLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPV
PLFDTQLAAAYLGMAHSMGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQH
LAQVYLALDARLSEEKRAWLLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRE
LCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIEL
IAQAARLPQSEWPEALPEPLPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLK
SGYPDGPYELPDSLRGWRRERMGQALLDALESA
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgctcgcatggcgccaggctctatataatgcgccgcacttgaccaaggagatgttcgtg
accgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaatgccgggaa
tggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgataccttctat
cccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatcgatccgctg
ctgatccaggactggagccccttcgccgagctgctcgaagacgagcgggtggtgaaggtg
ctgcatgcctgcagcgaagacctcgaggtgttcctgcgcctcaccggcagcctgccggtg
ccgctgttcgatacgcagttggccgccgcctatctcggcatggcccattcgatgggctac
tcgaagctggtgaaggaggtgctggacatcgacctgcccaaggacgagacccgttccgac
tggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgacgtccagcac
ctcgcccaggtctacctggccctggatgcgcggctgagcgaggagaaacgcgcctggctg
ctggaggacggcgccgaactggtcgccaacctctgccgcgagagcgatccgcgcgaggcc
taccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtgctccgcgaa
ctctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaaccacgtgctg
cgcgaacgcaccctgtggccgctggcgcgcctgctgccgaagaacaagaccgacctggcg
gcgatcgaggacatgcatccgcgcaccgtgcgccaggacggcgacttcctcatcgaactg
atcgcccaggctgcgcgcctgccgcagagcgaatggcccgaggcgctgcccgagccgctg
ccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgcgaagcggag
accctgggcatggcgcctgagctgatgctgcgcaagaagatcctcgaggcactgctcaag
agcggctatcccgacggtccctacgaactgcccgattccctccgcggctggcgccgcgaa
cgcatgggccaggccctgctggacgccctggagagcgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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