KEGG   Paenibacillus sp. FSL H7-0357: H70357_21105
Entry
H70357_21105      CDS       T03358                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
paeh  Paenibacillus sp. FSL H7-0357
Pathway
paeh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paeh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H70357_21105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paeh03019]
    H70357_21105
Enzymes [BR:paeh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     H70357_21105
Messenger RNA biogenesis [BR:paeh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     H70357_21105
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22
Other DBs
NCBI-ProteinID: AIQ18916
UniProt: A0A089I3V3
Position
complement(4678694..4680271)
AA seq 525 aa
MTFNDLNLIPAILKALSQENYTSPTPIQEESIPAALAGRDVLGCAQTGTGKTAAFSLPII
QLLSQQPSATGGRRRIRSLILTPTRELALQISENIQAYSKFTSIRSTAIVGGVSQKAQER
ALSQGADILIATPGRLIDLITQKHVDLQYVQILVLDEADRMLDMGFIHDVKRIIAKMPSK
KQTLFFSATMPTEISNLIKTLLVNPVKIEITPVSSTVDRIEQSIYLLENGNKQNQLNRLL
QDKSIVSALVFTRTKRGADRVTRDLTRINITAQAIHGNKSQNDRQNALRNFKSGATRVLV
ATDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGMSGIAISLCEAEEIPYLKDI
QKLIGKTIPEVKDHAYPMSKSAQALLNERPAKAPAKPAAKAKTNPARKPKSEWFTQGNRS
GSTSGGSKNSGQGSRLNGESAHQAGAGARPGSASAGGAGSSGRASGGNGSGASASSRPGG
YSGRPGERAGTGQNSRPAGSQGGRPGNNHSSRPGGRPAAKAGRSQ
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgacttttaatgatttgaatttgatcccagcgatcctcaaggcgttaagccaagaaaat
tatacatcacccacccccattcaggaggagtccattcccgcggctttggccggcagagac
gttctcggctgcgcacagaccggaacaggcaaaacagccgctttttccttgccgattatt
cagctgctaagccagcagccttctgcaaccggcggcagacgccggattcgttcgctgatt
ctcacaccgacaagagagcttgcactgcaaatctcggaaaatatccaggcttacagcaaa
ttcaccagtatccgttcaacagctattgttggcggtgtatcgcaaaaagctcaggagcgg
gcattaagccagggtgcggatatcctgattgccacgccaggccggctcatcgacctgatt
acccagaagcatgttgacctgcagtatgtgcagattcttgtactggatgaagcggaccgc
atgctggacatgggcttcattcatgacgtgaagcggattatcgccaaaatgccaagcaaa
aaacaaacattattcttctcggctacgatgccgacagaaatttcgaatttgattaaaaca
ctactggtgaacccggtgaaaatcgagattacaccagtttcctccaccgtggacagaatc
gagcagtcgatctatctgctggagaacggcaacaagcagaatcaattaaaccgccttctt
caggacaaatcgattgtctcggcactagtctttacccgcaccaaacgtggtgctgaccgg
gttacccgtgatttgacgcggattaatattactgctcaagcgattcacggcaacaaatcc
cagaatgaccggcaaaatgcgctgcgtaacttcaaaagcggagctacccgcgtgcttgtt
gctacagacattgccgcccggggaattgatattgacgagctgtcgcatgtcatcaacttc
aacctgccgaatattccggaaacttatgtccaccgtatcggccgtacaggccgtgccggt
atgagcggaatcgccatttctctttgtgaggccgaagagatcccgtacctcaaggatatt
cagaagctgatcggcaagacgatacctgaagttaaggaccatgcgtatccgatgtctaag
agcgcacaggctctgctgaatgaacgcccggcaaaagctccggcgaagccggcagccaag
gcgaagaccaatccggcgcgcaagccaaagtcggaatggttcacacagggcaaccgttca
ggcagcacttccggcggaagcaagaacagcggccagggcagcagactgaacggggaatcg
gctcatcaagcaggagcgggtgcaagacccgggagcgcttcggccggtggagctggttct
agcggcagagcaagcggaggaaacggcagcggagcaagtgctagcagccgcccaggcggc
tatagcggcagacctggcgaacgggctggtaccggacagaacagcagacctgccggcagc
caaggcggcagacccggtaacaaccacagcagccgcccaggcggcagacctgcagccaaa
gcgggcagatcgcaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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