KEGG   Paenibacillus sp. FSL H7-0737: H70737_05065
Entry
H70737_05065      CDS       T03359                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
paej  Paenibacillus sp. FSL H7-0737
Pathway
paej03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:paej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H70737_05065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paej03400]
    H70737_05065
Enzymes [BR:paej01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     H70737_05065
DNA repair and recombination proteins [BR:paej03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H70737_05065
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Other DBs
NCBI-ProteinID: AIQ22274
UniProt: A0A089JMM3
Position
complement(1146744..1147691)
AA seq 315 aa
MKLQPIIPFEPILAGQLPAGNQWIAQIKWDGVRMLSYYDGSTTQLINRRGNYRTAQYPEL
TDVNTYCKADSVILDGEIIALKDGKPSFHEVMRRDSLKNGSTISVVRYQVPVIYMIFDIL
FYNGQSTMDQPLFSRQQLLNDILLPHPHVQAVPSYTDPTELFAAAQSQSLEGIVCKDINS
TYAPGGKDKRWQKRKIISDITAVAGGVTFRDGIVNALLLGLYDDKGNLHYIGHAGPGKLT
VQDKRDLTAEVQHLKIDQMPFTTDPQRGKGAFWIKPKLVFKVHFLEWNTSGTLRQPVTQA
RVDLPPESCTMEQKG
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagcttcagcctattattccttttgaacccatactggctggacagcttccagcaggc
aaccagtggatcgcacagattaaatgggatggcgttcgcatgttgtcctattacgacgga
agcactactcagcttattaacagacgtggaaattaccgtacagcgcaataccctgagctt
actgatgtaaatacttattgcaaggctgattccgttattcttgatggtgaaatcattgca
ctcaaggacggcaagccctcatttcacgaagttatgcggagggatagcttaaagaatggc
tccaccatttccgtcgttaggtatcaggttcctgtcatttatatgatttttgatattctg
ttttataatggccaatcgacgatggatcagcctttattctcacggcagcagctgctaaac
gatattctgctgccgcatccccacgtacaggccgtacccagttataccgatcccacagaa
ttattcgccgccgctcagagtcagagcttagagggaatcgtctgtaaggatatcaacagt
acttatgctcccggtggaaaagataaacgctggcagaaacgcaaaatcatttcggatatt
acggcagtagccggaggtgtaaccttccgtgacggcatcgtcaatgcgcttcttcttggg
ctgtatgatgataaagggaatttgcattatatcggacatgccgggccaggaaaattgact
gtacaggataaacgcgacttaactgcagaggtacagcatttaaaaatagatcaaatgccc
tttacaactgatccccagcgagggaagggtgctttttggataaaaccgaagcttgtcttc
aaagttcattttttggaatggaatacctcaggcactctgcgccagcctgttactcaagct
agggtagatcttcccccggaatcatgcactatggagcaaaaaggataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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