KEGG   Paenibacillus sp. FSL R5-0912: R50912_26395
Entry
R50912_26395      CDS       T03334                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paeq  Paenibacillus sp. FSL R5-0912
Pathway
paeq03410  Base excision repair
paeq03430  Mismatch repair
paeq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paeq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    R50912_26395
   03430 Mismatch repair
    R50912_26395
   03440 Homologous recombination
    R50912_26395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paeq03400]
    R50912_26395
DNA repair and recombination proteins [BR:paeq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     R50912_26395
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     R50912_26395
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      R50912_26395
SSDB
Motif
Pfam: RecJ_OB DHH ssDNA-exonuc_C DHHA1 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AIQ43169
UniProt: A0A089LEF2
Position
complement(6004077..6006479)
AA seq 800 aa
MLHSKTRWQSPAADPEKNRELARSLSISPLLSSLLVQRGMDTADKALVFMDGGVEDSHDP
FLLKGMAEAVPRIRKALQDEEHILVYGDYDADGVSSTALMIFLLRHLGASFDIYIPHRSN
EGYGLHNHALDWALQQGVSLVITVDTGISAYHQIAYASELGIDVIVTDHHEPPELLPEAY
ALINPKLPDCPYPFKGLAGVGVAYKLAEALLGSGVPEEWCEIAAIGTVADLMPLLGENRS
LVRRGLTSMRNSPFPGIRALLSVCGITMSTVSAVNIAFGMAPRINASGRLDHAGRAVTLL
TTADAEEAEQFAGELDLLNKERQLVVERIVGEATEKLEQRISQTGLPDIIVLAEQGWNVG
VVGIVASKLLEKYYRPVIILDIYPDTGMCKGSARSIPGLDIYAALSSCAGLMDHFGGHPA
AAGMSLPQDKLEDFDAALNAYAASILTPEDFVAVTAADGEVSIADLSLQAALELERLAPF
GMANPLPRFILRGAAVKETRKMGQDGKHLKLVLQQDKVTIEAVAFGKGSLADLLPDGTVI
DVLAELSVNEWNGSRKPQLMLQDLAVPAAQLFDLRGAADAVKQAAHIQELLRSYSGSSPV
KTAAVFQNSRRSPLRELKGMSLWVYDEDAGISQVHQGEPGNDEAEITLLCLLDMPETPEQ
LEALFTAFPRTENIALLHSIRDGRDRLQVPTRDHFKSLYKLIASIAITATPEHEVLLRLS
RQSALGVRMLGRMLDVFAELDFIERSGGSITFVKKPAAKSLTASEHFVRLGKTAEMEQYF
MEGSRGELQEFMLSRRLGAS
NT seq 2403 nt   +upstreamnt  +downstreamnt
ttgcttcattcaaaaacaagatggcaatctccggcagccgatcccgagaaaaaccgggaa
ctggcccggagcctttctatttctccgcttctgtcctcactgctcgtgcaaagaggcatg
gatactgccgataaggcgctggtattcatggatggcggagtggaggatagtcatgatcca
ttcctgctcaaaggaatggccgaggctgtgccgcggattcgaaaggcattgcaagatgaa
gaacatattctggtgtatggcgattatgatgcagacggggtgtccagtactgcgctgatg
atctttcttctgcgtcatctgggtgcttcttttgacatttatatcccgcatcgttccaat
gaaggctacggtctgcataatcatgcgctcgattgggcgctgcagcagggagtatctctc
gttattactgtggatactggtattagtgcctaccatcagattgcttacgcttcagagctg
ggcattgatgtcatagtcacggatcatcatgagccgccggagctgttgcctgaggcttat
gcactcattaatccgaaactgccggactgcccgtatcctttcaaggggctggccggagtg
ggtgtagcttacaagctggcggaggcccttctgggcagcggagttcctgaagaatggtgt
gagattgccgctatcggtaccgttgcggatctgatgccgctgcttggggagaaccggagt
ctagtacgccgggggctaaccagcatgcggaattcgccgtttccgggaattcgggcgctg
ctctccgtctgcggaattacgatgagtacggtgagtgctgttaatattgccttcggcatg
gctccgcgcattaatgccagcggaaggctggaccatgccgggcgggcggttacactgctc
actaccgcagatgctgaagaggcagaacaatttgccggagagcttgacctcctgaataag
gaacgtcaactggtcgtcgagagaattgtaggggaagctacggagaagctggagcagaga
atcagtcaaaccgggcttccagatattattgtgctggctgagcagggctggaatgtcggc
gttgttgggattgtggcttctaagctgctggaaaaatattatcgtccggttattattctg
gacatttacccggatacagggatgtgcaaaggctctgcccgctcgatccccggactggat
atctatgcggcgttatcctcatgcgccggattaatggaccatttcggcgggcatccggct
gcggccggaatgagcctgccgcaggacaagctggaagattttgatgcagcgcttaatgca
tatgctgcatctatcctgacaccagaggactttgtagccgtgacggctgcagacggtgag
gtctcgattgctgatttgtcactgcaggctgcgcttgaactggagcggcttgcccccttc
gggatggctaacccgctgccgagattcattctgcgcggagctgcagtgaaggagacccgc
aagatgggccaggacggcaagcatctgaagcttgtcctgcagcaggataaggtgacgatc
gaagcggtggccttcggtaagggttccctggctgatctgctgcctgatggtacagtcatt
gatgtactggctgagctgtcggtcaatgaatggaacggctcacgcaagcctcagctgatg
ctgcaggatcttgcagtgcctgccgcgcagctgttcgacctgcgcggtgctgctgacgcg
gttaagcaggcggcgcatattcaggagctgctccgttcgtacagcggcagcagcccggtt
aagacagcagcggtctttcagaacagccgcaggtctccactgcgcgagctgaagggcatg
tcgctgtgggtctacgatgaggatgccggaatttcacaggtgcatcagggtgagccgggg
aatgacgaagcagagataacactgctctgtctgctggatatgccggaaacgccggagcag
ctggaagcactgttcactgcgtttccccgcacagagaatattgccctgctgcattcgatc
cgcgacggccgtgaccggctgcaggttcctacgcgggatcatttcaagtcgttatataaa
ttgatcgcctcgatcgcaataaccgcaacccccgagcatgaagtgctgctgcggctcagc
cgccagtctgcactgggtgtgcgtatgctgggcaggatgcttgatgtgttcgctgagctt
gatttcattgaacgcagcggaggaagcattacctttgtcaagaagcctgccgccaagagc
ctgacggcgtcagagcacttcgtcaggctgggcaagactgctgaaatggagcagtatttc
atggaaggcagccgcggcgaacttcaggaattcatgctgtcacgccggctaggcgcctcg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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