KEGG   Paenibacillus sp. FSL R5-0912: R50912_30860
Entry
R50912_30860      CDS       T03334                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
paeq  Paenibacillus sp. FSL R5-0912
Pathway
paeq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:paeq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    R50912_30860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paeq03021]
    R50912_30860
   03400 DNA repair and recombination proteins [BR:paeq03400]
    R50912_30860
Enzymes [BR:paeq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     R50912_30860
Transcription machinery [BR:paeq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     R50912_30860
DNA repair and recombination proteins [BR:paeq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      R50912_30860
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AIQ43901
UniProt: A0A089K492
Position
complement(6994286..6997831)
AA seq 1181 aa
MAGHLVQYGRRTRRSYARINEVLEVPNLIEIQQKSYDWFLEEGLREMFQDISPIQDFTGN
LVLEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTE
TGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKTYTATVIPNRGAWLELETDAKDIMY
VRIDRTRKIPVTVLLRALGFGSDAEILELLGNDEYIRNTLDKDNTDSTEKALIEIYERLR
PGEPPTLDNAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAQPLVDESTGE
ILAESGQMVDRRLLDELIPYFEKNVAGKNYRVTGGVMDSEDIPLQTIDVFSPIEEGRIIK
LIANGNIDKSVKHITQADIISSISYFINLLHGIGNTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDANAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFARINEYGF
IEAPYRWVDPKTGKVTEQIDYLTADEEDNYVVAQANVLIDENGTFKEDMVIVRYNKDSDN
ITTMPSNRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLIPKAPLVG
TGMEHKSAKDSGVCIVSKYDGIIERSSANEIWLRRVEAVEGKEVKGDIVKYKLHKFMRSN
QGTCINQRPLAKRGDIVKKGDILADGPSTEMGELALGRNVVVAFMTWEGYNYEDAILLSE
KLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALRNLDERGIIRIGAEINAG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGSDGIIVDVKVFTRENGD
ELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFLPDGTPVQVVLNP
LGVPSRMNIGQVLEVHIGMAALRLGIHVATPVFDGAREYDVFDTMEEAGMQRNGKTVLYD
GRTGERFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLG
MDVKILSGDEQEIEMKELDDEDETSGDKLSLNLEGAEVGIE
NT seq 3546 nt   +upstreamnt  +downstreamnt
ttggcaggacatcttgttcagtatggtcgacgcactcggcggagctatgcgagaattaac
gaggtactcgaggtcccgaacctgatcgagatccaacaaaaatcttatgactggtttttg
gaggaaggattgcgggaaatgttccaggacatctcgccgatccaggatttcacaggaaat
ttggtactagagttcattgattacagcctgggtgaaccgaagtatacggttgacgacgct
aaagagcgggacgtaacatatgcggctcctctgcgtgtaaaggtgcgtctcatcaataag
gagaccggtgaggtcaaagagcaggaagtgttcatgggagatttcccgctgatgacggaa
accggcacttttattatcaatggtgcggaacgggttattgtcagccagttggttcgctct
ccaagcgtctatttcagcacgaaagtggataagaacggcaaaaaaacctacaccgccaca
gtaattccgaatcgcggagcttggctggaactggagaccgacgctaaggacatcatgtat
gtccgtatcgaccggacccgtaagatcccggtaaccgtgcttctgcgtgctctaggcttc
ggcagtgatgctgaaattctggaactgcttggtaatgatgaatatattcgcaatacgctg
gataaagacaacacggactctacggagaaggcgcttattgaaatttacgagcgtctgcgt
ccgggtgaaccaccgacacttgacaatgccaagagcctattggtcgcacgtttctttgat
ccgaaacgttatgatttggccaatgtaggccgttacaaaatcaacaaaaaactgcatatt
aagaatcgtctgttcaatcagcgtctggcgcagcctttggttgatgaatctacaggagaa
atcctggcagaatccggccagatggttgaccgccgcctgcttgacgagctgattccttat
ttcgagaagaatgtagctggcaagaactaccgtgttaccggcggggttatggacagtgaa
gatattccgctgcagactattgacgtattctcgccaattgaagaaggccggattatcaag
ctgatcgccaatggcaacattgacaagtcggtcaagcatattacccaggctgatattata
tcctcaatcagctactttattaatttgctgcacggtatcggtaatacagatgatatcgac
cacttgggtaaccgccgtctgcgttctgtaggtgaattgctgcagaatcagttccgtatc
ggtctgtcccgtatggagcgcgtggtgcgggagagaatgtcaattcaggacgctaatgcg
attacaccgcaggcactgatcaacatccgtccggttatcgcgtcgatcaaagagttcttc
ggtagttcgcagctgtcccagtttatggatcagacgaacccgcttgctgaacttacacac
aagcgccgtctgtcggcacttggacccggcggtctgacccgtgaacgcgcaggctttgaa
gtccgcgacgtacatcacagtcactacggccgtatgtgtcctatcgaaacaccggaaggt
ccgaatatcggtctgatcaactccttgtctacctttgcacgcatcaatgaatacggcttt
atcgaagctccgtatcgttgggtggatccaaagactggtaaggttacagaacaaatcgat
tatctgactgctgatgaagaagataactatgtagttgctcaggcgaatgtactgattgat
gagaatggtacatttaaggaagacatggttatcgttcgttacaacaaggattcagataac
attactactatgcctagtaaccgtgttgactacatggacgtttcacctaagcaggttgtg
tcggtcgctacggcgctcattccgttccttgagaacgatgactccaaccgcgcactgatg
ggatcgaacatgcagcggcaggccgttccgcttctgattccgaaagctccgcttgtcggc
acagggatggaacataaatccgccaaggattctggcgtatgtattgtttccaaatatgac
ggtattattgaacgctcctctgccaatgaaatctggctgcgccgtgtagaggcagttgaa
ggcaaggaagttaaaggcgatatcgttaaatataaattacacaaatttatgcgttcgaac
caagggacttgcattaatcagcgtccgctggctaaacgtggcgatattgttaagaagggt
gatatcctggcagacggaccttccacagaaatgggcgaacttgctcttggccgtaacgta
gtcgttgcgttcatgacttgggaaggttacaactacgaggatgcgatcctgctcagtgag
aagctggttaaggaagatgtatacacttcgatccatatcgaggaatatgaatccgaagcc
cgtgacaccaagctaggacctgaagagatcacgcgtgatattccaaacgttggtgaagag
gcgctccgcaatttggatgagcgcggaatcattcgtatcggtgcggaaatcaatgccggc
gacattctggtaggtaaagttactccgaagggcgtaactgaactgactgctgaagaacgc
ctgctgcacgcaatcttcggtgagaaggctcgtgaagtccgtgatacctccttgcgcgtt
ccgcatggtagtgatggtattatcgttgacgttaaggtgtttacccgtgagaacggcgat
gagctgcctccaggtgtgaatcaattggttcgtgtctacatcgctcagaagcgtaagatt
tctgaaggtgacaagatggccggacgtcatggtaacaagggtgtcgttgcccgtatcctg
ccagaagaagatatgccgttccttccggatggtacaccggtacaggttgtcctgaacccg
ctgggcgtaccttcacgtatgaacatcggacaggtgctggaagtccatataggtatggcg
gcactgcgtctgggtatccacgtggctactccggtattcgacggagcccgtgagtatgac
gtgttcgatacgatggaagaagccggtatgcagcgtaacggtaagactgtgctgtatgac
ggacgtacaggcgagcgcttcgagcgtgaagttactgtcggcgttatgcacatgatcaag
cttgcgcacatggttgacgataagattcatgcccgttctacaggtccttactcactcgtt
acacagcagccactgggtggtaaagctcagttcggcggacagcgtttcggggaaatggaa
gtgtgggcgcttgaggcttacggcgcggcgtatacattgcaagaaattttgaccgtgaaa
tccgatgacgtggttggccgtgtgaaaacgtacgagtccatcgtcaaaggtgaaaatgtt
ccagaaccgggtgttccggaatcgttcaaggtattgatcaaggaactgcagtcgctgggt
atggatgtcaaaatccttagcggtgacgagcaggagatcgagatgaaggaactggacgat
gaggacgagacgtcaggcgacaagctgagcctcaatttggaaggcgcagaagtcggcata
gagtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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