KEGG   Pseudomonas aeruginosa PA38182: BN889_00528
Entry
BN889_00528       CDS       T03031                                 
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
paeu  Pseudomonas aeruginosa PA38182
Brite
KEGG Orthology (KO) [BR:paeu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paeu03009]
    BN889_00528 (dbpA)
Enzymes [BR:paeu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     BN889_00528 (dbpA)
Ribosome biogenesis [BR:paeu03009]
 Prokaryotic type
  rRNA helicases
   BN889_00528 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA CMS1 ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: CDI88607
Position
complement(540227..541603)
AA seq 458 aa
MTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDLIAQAKTGSGKTAAFGL
ALLSPLNPRYFGCQALVLCPTRELADQVAKEIRRLARAADNIKVLTLCGGVPYGPQVASL
EHGAHVVVGTPGRIQEHLRKGTLVLDGLNTLVLDEADRMLDMGFYDSIAEIIGQLPERRQ
TLLFSATYPDGIEKLAKTFMRDPRQVRVESLHADSQIEQRFFEIDPKQRMDAVVRLLQHF
RPQSSVAFCQTRQQCQELADALKAQRISALALHGDLEQRERDQVLTVFANRSCNVLVATD
VAARGLDIAALETVINVELARDPEVHIHRIGRSGRAGEKGLALSLVAPAEASRAQAIEDL
QKQPLAWYALGQLKASPEPLLPPMSTLCIAGGRKDKVRPGDLLGALTGDAGLPGSAVGKI
AIFDFQAFVAIERGLAHQALKRLSEGKIKGRSFKVRLL
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgacctccaccgctttctcctcgctgccgctttccgcggacctcctggccaatctcgac
tccctcggttaccgggagatgacgccgatccaggcgcagagcctgccgctgatcctccag
ggccacgacctgatcgcccaggccaagaccggcagcggcaagaccgcggccttcggcctc
gccctgctcagcccgctgaacccgcgctacttcggctgccaggcgctggtgctgtgcccg
acccgcgaactggccgaccaggtcgccaaggagatccgccggctggcccgcgccgccgac
aacatcaaggtcctgaccctctgcggcggcgtcccctacggcccgcaggtggcttcgctg
gagcacggcgcgcacgtggtggtcggcaccccggggcgcatccaggagcacctgcgcaag
ggcaccctggtcctcgacgggctcaataccctggtcctcgacgaagccgaccggatgctc
gacatgggcttctacgacagcatcgccgagatcatcggccagctccccgagcgccggcag
accctgctgttctccgccacctacccggacggcatcgagaagctggcgaagaccttcatg
cgcgatccgcgacaggtgagggtcgagtcgctgcacgccgacagccagatcgagcaacgt
ttcttcgagatcgatccgaaacagcgcatggacgccgtggtacgcctgctccagcatttc
cggccacagtccagcgtggccttctgccaaacccgccagcagtgccaggagctggccgac
gcactgaaggcgcagcggatttccgccctggccctgcacggcgacctggagcagcgcgag
cgcgaccaggtcctgacggtgttcgccaaccgcagttgcaacgtactggtggccaccgac
gtggccgcccgcgggctggacatcgccgccctggaaacggtgatcaacgtcgagctggcg
cgtgacccggaggtccacatccatcgcatcggacgcagcggtcgcgccggcgagaaaggc
ctggccctgtcgctggtggcgccggccgaggccagccgcgcgcaggccatcgaggacctg
cagaagcagccgctggcctggtacgccctcggccagttgaaggccagcccggagccattg
ctgccgccgatgagcaccctgtgcatcgccggcggacgcaaggacaaggtgcgccccggc
gacctgctcggtgccctcaccggcgacgccgggctgcccggcagcgcggtgggcaagatc
gccatcttcgacttccaggccttcgtcgccatcgagcgcggcctcgcccaccaggccctc
aagcgcctgagcgaaggcaagatcaagggtcgctcgttcaaggtccgcctgctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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