KEGG   Pantoea agglomerans C410P1: BEE12_12520
Entry
BEE12_12520       CDS       T04739                                 
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pagc  Pantoea agglomerans C410P1
Pathway
pagc00020  Citrate cycle (TCA cycle)
pagc00190  Oxidative phosphorylation
pagc00650  Butanoate metabolism
pagc01100  Metabolic pathways
pagc01110  Biosynthesis of secondary metabolites
pagc01120  Microbial metabolism in diverse environments
pagc01200  Carbon metabolism
Module
pagc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pagc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pagc_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:pagc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    BEE12_12520
   00650 Butanoate metabolism
    BEE12_12520
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    BEE12_12520
Enzymes [BR:pagc01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     BEE12_12520
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 GIDA HI0933_like DAO Ins_P5_2-kin DUF4376 BEX
Other DBs
NCBI-ProteinID: AOE40595
Position
2743339..2745105
AA seq 588 aa
MSLPIREFDAVVIGAGGAGMRAALQISQGGQSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNADGAVVGC
TAICIETGETVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHLKLKLDHLGKEVLESRLPGILELSRTFAHADPIKEPIPVIPTCHYMMGGI
PTKVTGQALRVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLL
ASIQEQGDLRDATEDEIAGAMARFNRWENNTTGEDPVEIRKALQRCMQNNFSVFREGEAM
AQGLEELKEIRQRLKSARLDDRSPDFNTQRIECLELDNLMETAFATAVAANYRTESRGAH
SRFDFPDRDDENWLCHSLYVPETESMTRREVNMQPKLRAAFPPKVRTY
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagtttgccaatcagagagttcgatgccgtggtaatcggcgcaggtggcgcaggaatg
cgagccgcactgcaaatctcccagggcggccagagctgtgccctgttatctaaagttttc
ccgacccgttcccacaccgtatctgcgcagggcggtattaccgttgcgctgggtaatacc
catgaagataactgggaatggcacatgtacgacaccgtcaaaggttccgactatatcggt
gaccaggacgcgattgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatgggtttacctttctcgcgtctggaagatggtcgtgtctatcagcgtccgtttggt
ggccagtcaaagaatttcggtggcgagcaggcggcacgtacggcggctgcggctgaccgt
accggtcacgcattgctgcacactctttatcagcagaacctgaaaaacaaaaccactatc
ttctctgagtggtatgcactggatctggtgaaaaacgccgatggcgcagtcgtgggttgt
accgctatctgcatcgaaaccggcgaaaccgtttatttcaaagcgaaagcgaccattctg
gccactggcggcgcgggccgtatctaccagtctaccaccaatgcacacatcaacaccggt
gacggcgtaggtatggcactgcgtgcgggcgtaccggtgcaggatatggagatgtggcag
ttccacccaaccggtatcgccggtgcgggcgtgctggtcaccgaaggctgccggggtgaa
ggcggctatctgctgaacaaacatggcgaacgcttcatggagcgttatgcgccgaacgcc
aaagatctggcgggccgcgacgtggttgcgcgctcaatgatgattgaaatccgtgaaggt
cgcggctgtgatggcccgtggggtccacatctcaaactgaaactggatcatctgggtaaa
gaggtgcttgagtcacgtctgcctggcatccttgagctgtcacgcacctttgcgcacgcc
gatccgattaaagagccgattccggtcattccaacctgccactacatgatgggcggtatt
ccgaccaaagtgaccggccaggctctgcgcgtcaatgagcagggcgaagatgtagtgatt
ccaggcctgttcgccgtcggtgaaatcgcttgcgtatcggtgcatggtgccaaccgtctg
ggcggtaactcactgctcgacctggtggtctttggccgtgctgcgggtctgcatctgctg
gcgagtattcaggagcagggcgacctgcgtgatgccacagaagatgagatcgctggggcg
atggcgcgtttcaaccgctgggaaaacaacaccacgggtgaagatccggttgagattcgt
aaagcgctgcaacgctgcatgcagaataacttctcggtattccgtgaaggcgaagcgatg
gcacagggtctggaagagctgaaagagattcgccagcgcctgaagtcagcgcgtctggat
gaccgctcaccggatttcaacacccagcgtattgagtgcctggagctggataacctgatg
gagacggcctttgccacggcggtagcggctaactatcgcaccgaaagccgcggtgcgcac
agtcgcttcgacttcccggatcgtgatgatgaaaactggctgtgccacagtctttatgtc
ccggaaaccgaaagcatgacgcgccgtgaggtgaacatgcagccgaaactgcgcgcggcc
ttcccgccgaaagtgcgtacctactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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