KEGG   Pantoea vagans FDAARGOS_160: AL522_08035
Entry
AL522_08035       CDS       T04302                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pagg  Pantoea vagans FDAARGOS_160
Pathway
pagg03030  DNA replication
pagg03430  Mismatch repair
pagg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pagg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL522_08035
   03430 Mismatch repair
    AL522_08035
   03440 Homologous recombination
    AL522_08035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pagg03032]
    AL522_08035
   03400 DNA repair and recombination proteins [BR:pagg03400]
    AL522_08035
Enzymes [BR:pagg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL522_08035
DNA replication proteins [BR:pagg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL522_08035
DNA repair and recombination proteins [BR:pagg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL522_08035
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AMG57585
Position
1020975..1024457
AA seq 1160 aa
MAEPRFIHLRVHSDYSMVDGLAKTGPLIKKAAALGMPAIAITDFTNLCGLVKFYGGAHSA
GIKPVIGADFNVASELMGDELTQLTVLASSDTGYQNLTLLISRAYQRGYGVDGPIIDRDW
LIELQEGLILLSGGRRGDVGRSLLRGNNALVSQCLSFYQQHFPDHYYLELIRTGRQDEES
YLHAAVELAIAEGIPVVATNEVCFINAEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVVKSREGL
EERLVFLFPDEAERAEKRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFIAEPQ
LPAMYDADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEHGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKEGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFRDGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNEAGEIVYGIGAIKG
VGEGPIEAIIDARNEGGYFRELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALSDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASVTPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKITVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLIGSEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggctgaaccccgttttatacatctgcgtgtccatagtgactattcgatggttgatggc
ctggcgaaaaccgggccgttgatcaagaaggcggctgcccttggcatgcctgctatcgcg
attaccgacttcactaacctgtgtggtctggtgaaattttacggtggcgcacacagcgca
gggataaagccggtcattggtgccgatttcaacgttgccagtgagctgatgggggatgag
ctgacccagctgaccgtgctggcgtccagtgataccggataccagaacctgacgctgttg
atctcccgcgcctatcagcgtggttatggcgtggacgggccgatcatcgatcgcgactgg
ctgattgagttgcaggaagggttaattctgctgtcgggcgggcgacgtggcgatgtgggc
cgcagcctgttgcgtggcaacaatgccctggtttcgcagtgtctgtcgttttaccagcag
catttccccgatcattactatctggagctgatccgcactggtcgtcaggacgaagagagc
tatctgcatgccgccgttgaactggcaattgccgagggcattccggtcgtcgccaccaat
gaagtctgctttatcaacgcagaagatttcgatgcgcacgaaattcgcgttgcgattcat
gacggctatacgctggatgatcccaaacgtccgcgcaactacagccctcagcaatacatg
cgcagcgaagaagagatgtgcgagctgttctcggacatcccggaagcgctggaaaacagc
gtagagattgctaagcgttgtaacgtgacggtccggctcggcgagtacttcctgccgcag
ttcccgaccggcgatatgaccactgaagattatctggtggttaaatcccgtgagggactg
gaagagcgtctggtgttcctgttcccggacgaggctgagcgcgcggaaaaacgcccggaa
tatgatgagcgtctggaaattgaactcaacgttatcaaccagatgggcttccccggctac
ttcctgatcgtaatggaattcatccagtggtccaaggataacggcgtgccggtcggaccg
ggccgtggttcgggtgcgggttcgctggtggcctatgcgctgaaaatcaccgatatcgat
ccgctggaatttgacctgctgtttgaacgctttttgaacccggaacgtgtttcgatgccc
gactttgacgtcgacttctgcatggagaaacgcgatcaggtgatcgaacacgttgccgat
atgtacggtcgtgaagcggtttcccagattattaccttcggtaccatggcggccaaagcg
gttatccgcgatgtgggtcgcgtgctggggcatccttacggcttcgttgaccgtatttca
aaactgatcccgcccgatcccggcatgacgctggaaaaagcgtttattgctgaaccacaa
cttcctgcgatgtatgacgcagatgaagaggttaaagcgctgatcgacatggcgcgcaag
ctggaaggggttacgcgtaacgccggtaagcatgcgggtggcgtggtcattgcgccaacg
aagatcaccgattttgcgccgctctattgcgatgagcacggccagttcccggtcacccag
ttcgataaaaatgatgtggaatatgccggcctggtgaagttcgacttcctgggactgcga
acgctaaccatcatcgactgggcactgaagatgatcaacccgcgccgggaaaaagaggga
ctggagccgatcgatatcgccgcgatcccgctggatgataagaaaagtttcgatatgctg
cagcgctcggaaaccaccgcggtgttccagcttgaatcgcgcggcatgaaagatctgatt
aagcgtcttaagcccgactgcttcgaagatatgatcgcactggtggcgctgttccgtcct
ggccctctgcagtccggcatggtagataacttcatcgaccgtaagcatggccgggaagcg
atctcctatcccgatatccagtggcagcatgaaagccttaagccagtgctggagccgacc
tacggcatcatcctctatcaggaacaggtgatgcagatcgcccaggtcctgtccggttac
accctgggcggtgcagatatgctgcgtcgcgccatgggtaaaaagaaacccgaggagatg
gctaagcagcgttcagtcttcagagacggtgccgaaagcatgggtatcgacggcgaactg
tcgatgaagatcttcgatctggtggagaaatttgcaggttatggctttaacaagtcacac
tctgcggcctacgcactggtctcctatcagacgctgtggctgaaagcgcactatccggct
gagtttatggcggcggtgatgactgccgatatggataacaccgagaaagtagtcggcctg
gtcgatgagtgctggcgaatggggctgaaagtcctgccgcccgatattaactccggtctc
tatccgttccacgttaacgaagcgggcgagatcgtgtacggcataggcgcgatcaaaggc
gtgggcgaaggtccgatcgaagcgatcatcgacgcccgtaacgaaggcggctatttccgc
gagctgtttgatctctgtgcccgtaccgataccaaaaagatcaaccgtcgggtgatggag
aaactgatcatgtccggggcctttgatcgcctcggaccgcatcgcgccgcgctgatgagt
gcactcagcgacgcgctgaaagcggccgatcagcacgcgaaagcggaagcgattggtcag
gcggatatgtttggcgtgctggcggaagagccggagcaggtggagaaatcatacgccagc
gtcacgccctggcctgagcaggtgcagctggatggcgaacgggaaacgctggggttatac
ctgaccggccatccgattaatcagtatctcaaagaaattgagcgttacgttggcggggtg
cggctgaaagatatgcatcctaccgatcggggtaaaattaccgtggcggccggtctggtg
atcgccgcgcgggtaatggtgaccaaacgcggcaaccgaattggtatctgcactctggac
gatcgctccggtcgtctagaggtgatgttatttaccgatgcgttagataaataccagcag
ttgctggagaaagaccgaatcctgatcgtcagcggacaggtcagctttgatgacttcagt
ggtgggcttaaaatgaccgcgcgtgaagtcatggacatcgacgaagctcgcgaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagctattaaaccga
ctccgtcagtccctggaaccccatcgatcagggactattccggtgcatctctactatcag
agagccgacgcgcgagcgaagctgcgctttggtgcagcgtggcgtatttcgcccagcgat
cgtttacttaacgatctgcgctcgttgattggatcggagcaggtggaactggagtttgac
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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