KEGG T00073: PAE0833

Pyrobaculum aerophilum: PAE0833

Entry

PAE0833 CDS T00073

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

pai Pyrobaculum aerophilum

Pathway

pai03030	DNA replication
pai03410	Base excision repair
pai03420	Nucleotide excision repair
pai03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:pai03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:pai03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pai03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pai03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

18312215

NCBI-GeneID:

1465293

UniProt:

O93723

Position

479299..481053

AA seq 584 aa
MQFGELVKALAAIEATTQRTTMVKLLVSLFKKASPEEVGKIVYFILGDLRPPWEGVELGV
AEKLCLRAVSKATGAAVSELEALYKKTGDVGEAARRALAASKRPGLLAFGSQKPLEVSEV
YDTLLKVARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALS
DAYGVNKEALEKAYHIYPDLGRLAKHVAEGKPLDEIRITPGVPVLPMLAQRLSSASEILA
KLGGSAICEYKYDGERAQIHLTPGGVKIFSRRLEDITHAYPDVVKAVKEAVSAKEAILEG
EIVAVDPDTGDMLPFQELMHRKRKHDVATAVELYPTVLYLFDVLYVDGEDLTEEPLIYRR
VRLSEIVCETDKVSIAKWRIFDNAEAVDVFFHESVSMGTEGLICKSPSSIYEMGARGWNW
IKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTD
ADLKKMYEILQPFKIPHRHPRVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRP
GVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELYKRQKKVVQPE

NT seq 1755 nt +upstreamnt +downstreamnt
gtgcagtttggggagttagttaaggcacttgcggcaattgaggccaccactcagaggaca
acaatggtcaagttgctcgtctcgctttttaaaaaggcgtctccagaggaggtcgggaaa
attgtgtacttcatcctcggcgatttgaggcctccttgggagggggttgagttgggggtt
gctgagaagctctgtttgagggcggtttctaaggccacgggggcggccgtatccgagctg
gaggctttgtataagaaaacgggcgacgtgggcgaggcggcgcgtcgcgccttggccgcg
tctaaacgccctggtttactggcctttggctctcaaaagccgcttgaggtgtctgaagtt
tacgacacgttgttaaaagtggccagggcaacgggggagggggctcaagatatgaaagtg
gctttgctgtcctctctctttgccagggcgactccagaggaggggaagtacattgccaga
tttgttgtggggaagttgaggctgggcgtcgccgacatgactattattgaggcgctttca
gacgcctacggagttaataaggaggctttagaaaaggcgtatcacatataccccgactta
ggccggctggctaaacacgtcgccgagggcaagccgcttgacgaaataagaattactccc
ggcgtgccggtgcttcccatgttggcgcagaggctgtcttccgcctctgagattttggct
aagctgggcggctcggcgatttgcgagtataaatacgacggagagagggcccagatacac
ctcactccaggcggcgtgaaaatattcagcaggaggcttgaggacatcacccacgcctat
cccgatgttgtcaaggcggttaaagaggctgtgtccgcaaaggaggcgattttagagggg
gagatagtggctgttgatcccgatactggggacatgttgccttttcaagagcttatgcat
aggaagaggaaacacgatgtggcaacagccgtggagctgtaccccacagtgttgtattta
tttgacgtcttgtacgtcgacggcgaggatttaacagaagagcctcttatatacaggagg
gtgaggctttctgaaattgtctgcgagactgacaaggtgtcaatagccaagtggagaatt
tttgacaacgccgaggctgttgacgtctttttccacgagtctgtgtctatgggcactgag
ggcttgatatgtaaatcgccttcttcaatttacgaaatgggggccaggggctggaactgg
attaaatacaagcgggattaccgtagcgagatgatagatacagtagacctcgttgtagta
ggcgccttccacggcaggggcaagagggccggcctatacggcgcctttctcttggcggca
tacgatccttccactgacatgttttatactgtgtgtaaagttggaagtgggtttacagac
gccgatttgaaaaaaatgtacgagattttgcagccgtttaaaatcccccacagacacccc
agagttgtgtctaaaatggaggcggatgtgtggttcgtgccccaggtagttattgaggtt
ataggggctgagattactctgtcgcctctccacacttgctgtttaggcgcagtgcgcccg
ggggttgggctggcggttagattccccagatttactggccgttatagatctgacaaatcc
ccagagcaagcaacgacggtggcggagatgttagagctgtacaagaggcagaaaaaagtg
gttcagcccgagtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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