KEGG   Pantoea ananatis AJ13355: PAJ_3643
Entry
PAJ_3643          CDS       T01969                                 
Symbol
holC
Name
(GenBank) DNA polymerase III chi subunit HolC
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
paj  Pantoea ananatis AJ13355
Pathway
paj03030  DNA replication
paj03430  Mismatch repair
paj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAJ_3643 (holC)
   03430 Mismatch repair
    PAJ_3643 (holC)
   03440 Homologous recombination
    PAJ_3643 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paj03032]
    PAJ_3643 (holC)
   03400 DNA repair and recombination proteins [BR:paj03400]
    PAJ_3643 (holC)
Enzymes [BR:paj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PAJ_3643 (holC)
DNA replication proteins [BR:paj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PAJ_3643 (holC)
DNA repair and recombination proteins [BR:paj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PAJ_3643 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: BAK13722
UniProt: A0A0H3L2V9
Position
complement(4363578..4364036)
AA seq 152 aa
MKNATFYVLETDASSDGLSAVEALVCDLAETRWRAGKRVLIACEDEQQAIRLDEALWQRP
ANAFVPHNLAGEGPRYGAPVELAWPQRRGNSPRDLLISLLPQFADFATAFHEVIDFVPYE
DALKQLARDRYKAYRSVGFQLNTATPPQPQTT
NT seq 459 nt   +upstreamnt  +downstreamnt
atgaaaaacgcaaccttctacgtgttggaaaccgatgcatccagcgatggcttaagcgcc
gttgaagcgctggtgtgcgatctggcggaaacacgctggcgggccggtaagcgggtgctc
atcgcctgtgaagatgagcagcaagccattcggcttgatgaggcgctgtggcagcgcccc
gccaacgcctttgtgccgcacaatctcgccggggaaggtccgcgctacggcgcaccggtt
gagctggcatggccgcagcgtaggggcaattcgccacgcgacctgctgatcagcctgctg
ccgcagttcgcagattttgctactgctttccatgaagtgatagacttcgttccttacgaa
gacgctctcaaacagctggcgcgcgatcgctacaaagcgtatcgcagcgttggcttccaa
ttgaatacggcaacgccgccacagccgcaaacgacatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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