KEGG   Providencia alcalifaciens: CO695_08230
Entry
CO695_08230       CDS       T05107                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
pala  Providencia alcalifaciens
Pathway
pala03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pala00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CO695_08230 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pala03400]
    CO695_08230 (recD)
Enzymes [BR:pala01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CO695_08230 (recD)
DNA repair and recombination proteins [BR:pala03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CO695_08230 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N Helicase_RecD UvrD_C_2 Viral_helicase1 SH3_13 AAA_11 UvrD-helicase AAA_22 AAA_16 nSTAND3 SLFN-g3_helicase PhoH AAA_28 NACHT NTPase_1 UvrD_C MukB SRP54
Other DBs
NCBI-ProteinID: ATG16283
UniProt: A0A9N7E2G3
Position
1784165..1786090
AA seq 641 aa
MKVLFNQAIEARLFTPLDVQFAYNIANEENPILLLVGALLSAETMSGHVCLSLDDIHPNS
LFMGRHPEFAAQLWQMIGEPDPSTIRAALLSSESVCEVGNNGVAPLILSGDFLYFQRMWQ
YEQCVAHFFSQTGSTDCDVVKTPSILSQLFPVSENIDWQKIAAAVAVTSRVSVISGGPGT
GKTTTVAKILALLIKLGHLPHRLRIELAAPTGKAAARLTESLGHALKQLPLNDEERTLLP
TQAKTLHRLLGAQPESQQFRYHRDNPLALDILIVDEASMVDLPMMSKLIEALPNSAKLIF
LGDKDQLASVEAGAVLGDICRFADKGYSYERAAQLESLTGCPLSDFTSNEGPVIRDSLCL
LRKSYRFSAESGIGQLAYAVNAGNVKRVDEILTQNFADIHNYISNNNPNSPSEHEAQSEL
ESGESYAQMLLDAVGFYQNYLLAVKVGEKPADILYKFNQYRLLAALREGAYGVSGLNDKL
EKLLHRQGLITKPYNLQHKHYVGRPIMISRNDSALGLFNGDIGIILFDEERQLRAYFQFP
DGTIRGIQPNRLPAHETAYVMTVHKSQGSEFAHTALVLPYVYSPVITRELVYTAMTRAKN
ELSLYGSKKVLRRAIETPTKRRSGLALQFEQLNSHHGIAKN
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgaaagtgctatttaatcaagctattgaagcgcgtttattcacgcctcttgatgtacaa
tttgcctataatattgcaaatgaggaaaacccaatacttttgctggtgggagcacttctt
agcgcggaaaccatgtcagggcatgtctgtttatcactagatgatattcatcctaactcg
ttatttatgggaagacaccctgagtttgcagcgcagttgtggcaaatgataggggagccg
gatcctagcacgataagagccgcattgctgtcgagtgagtcagtatgtgaagttggaaat
aatggcgtagctcccttgatattgtccggtgattttctttattttcaacgcatgtggcaa
tatgagcagtgtgtcgcacactttttttcacagacagggtcaacagattgtgatgtagtt
aaaaccccgtcaattttgtcgcagttattcccagtctctgaaaatattgattggcaaaaa
attgctgctgcagttgctgtcacaagccgagtttcagtcatctccggtggacccggaaca
ggtaaaaccacgacagtagctaaaattttagcgttattgattaagttaggtcacctgcca
catcgtttacgcatcgaattagccgcgccaacaggtaaagccgccgcacgtttaacggaa
tctttagggcatgctctgaagcagttgccgctgaatgatgaagagcgaacgttgttaccc
acccaagccaaaacattacatcgcttgctaggcgctcagccagaaagccaacaatttcgt
tatcatcgtgataacccgttggcactggacatactgattgtggatgaagcatcgatggta
gacttaccgatgatgagcaaactcattgaagcgttgcctaactcggctaagttgatattt
cttggggataaggatcagctcgcatcagtcgaggcgggggctgttcttggggatatttgt
cgttttgccgataaaggttatagctatgagcgagctgcccagcttgaatcactgactgga
tgcccattaagtgattttacctccaatgaagggcctgttattcgcgatagtttatgttta
ctgagaaaaagctaccgtttttctgctgagtcagggatagggcaattagcctatgccgtc
aacgcaggaaatgtaaaacgggttgatgaaattcttacccagaatttcgcagacattcat
aattatatttctaacaataatccaaatagtccctctgaacatgaagcccaatctgagctc
gaaagtggagaaagttacgctcagatgttattagatgccgttggtttctatcaaaactat
ctgttggcggttaaagtcggtgaaaaacctgcagatattctttataaatttaaccaatac
cgtttgcttgctgcattaagagaaggggcttacggggtttctggtttaaatgacaagctt
gaaaaattacttcaccgccaaggcttaattacaaagccgtataatttacaacataaacac
tatgttggaagacctatcatgatcagccgtaatgatagtgctttggggctctttaatgga
gatattggtattattctatttgacgaagagcggcaactaagagcctattttcagttccct
gacggtactattcgtgggattcaaccgaatcgattaccagcccatgagacagcttatgtg
atgacggtacataaatcacaaggttcagagtttgctcataccgccttggttttaccctat
gtatattcgcctgtgattactcgtgaacttgtctatacggcaatgactcgagccaagaat
gaactttcgttgtatggcagtaaaaaagtgttgcgtcgcgcgatagaaacgccgactaaa
cgccgtagcggcttagcattacagtttgagcaattaaacagtcaccatgggattgctaag
aactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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