KEGG   Pteropus alecto (black flying fox): 102880629
Entry
102880629         CDS       T02993                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03018  RNA degradation
pale03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102880629 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102880629 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pale03019]
    102880629 (LSM4)
   03041 Spliceosome [BR:pale03041]
    102880629 (LSM4)
Messenger RNA biogenesis [BR:pale03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102880629 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     102880629 (LSM4)
Spliceosome [BR:pale03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    102880629 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 102880629
NCBI-ProteinID: XP_006904365
Position
Unknown
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttccattgtccctgctgaagacagctcagaatcatcccatgttggtggagcttaaa
aatggggagacttacaacggacacctggtaagctgtgacaactggatgaacatcaacctg
cgtgaggtgatctgcacatccagggatggggacaagttctggcggatgcctgagtgctac
atccgtggcagcaccatcaagtacctgcgcatccctgacgagattatcgacatggttaag
gaggaggtggtggccaagggccgcggccgtggtggcctacagcagcagaagcagcagaaa
ggccgaggcatggggggtgccggacgaggtgtgtttggcggccggggccgaggcgggatc
ccaggcacaggaagaggtcagccagaaaagaagccaggtcggcaggcgggcaaacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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