KEGG   Pteropus alecto (black flying fox): 102885945
Entry
102885945         CDS       T02993                                 
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03015  mRNA surveillance pathway
pale03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102885945 (PABPC4L)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102885945 (PABPC4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pale03019]
    102885945 (PABPC4L)
   03041 Spliceosome [BR:pale03041]
    102885945 (PABPC4L)
Messenger RNA biogenesis [BR:pale03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102885945 (PABPC4L)
   mRNA cycle factors
    Stress granule specific factors
     102885945 (PABPC4L)
Spliceosome [BR:pale03041]
 Complex C
  Other components
   Complex C specific factors
    102885945 (PABPC4L)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded Nup35_RRM RRM_7 MARF1_RRM1 DUF4523 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 102885945
NCBI-ProteinID: XP_015449384
UniProt: L5KAW9
Position
Unknown
AA seq 370 aa
MNVEAKYRQASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLH
LADAQKALDTMNFDMIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLHKSIDNKTLYEHFSA
FGKILSSKVMSDDAGSRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQA
ELQNKANEFTNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFVSFDSH
EAAQRAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMKQERYRRFRGVKLYIKNL
DDSIDDERLRREFSSFGSISRVKVMKEEGRSKGFGLICFSSPEEATKAMVEMNGRILGSK
SLNIALAQRP
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaatgtggaagccaagtaccgccaggcctccctgtacgtgggcgacctccacgcggag
gtcaccgaggacctgctgttcaagaagttcagcgccgtggggcccgtgctgtccatccgc
atctgcagggacctggtcacccagcgctcgctgggctacgcctacgtgaacttcctgcac
ctggccgatgcccagaaggccctggacacgatgaactttgacatgatcaaaggcaagtcc
atccggctcatgtggtcccagcgcgacgcttacttgaggaaatcgggcatcgggaacgtg
ttcatcaagaacttgcacaagtccattgataacaaaacgctgtatgagcacttctcggcc
ttcgggaagatcctgtcctccaaggtgatgagtgacgacgcaggctcccggggctacgcc
ttcgtgcacttccagagccagacggccgcggaccgcgccatcgaggcgatgaacggggcg
ctgctcaagggctgtaggctgttcgtcggcccgttcaaaaaccgcaaagatcggcaggct
gagctccagaataaagccaatgaattcaccaatgtctacatcaaaaacttcggagacgac
atggacgatgagagactgaaggagattttcagtcatttcggcaaaatcctgagcgttaag
gtgatgacagattcccgtgggagatccaaaggctttggcttcgtgagttttgacagccat
gaggctgcccagagggctgtggaaatcatgaatgggaaggacttgagtggacagccgctt
ttcgtaggccgggcacaaaagaaagcagagcgtcaggccgagttaaagctaatgtttgag
cagatgaaacaggagagataccggaggttccggggcgtgaagctctatatcaagaacctg
gatgacagcatcgatgatgaacgtctacggagagaattttcttcatttggatcaattagc
agagttaaggtcatgaaggaggaaggacgaagcaaagggtttggcttgatctgcttctcc
tctccagaggaagccactaaagcaatggttgagatgaatggccgtattttgggctccaag
tccctcaacattgccctggcccagaggccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (36)   

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