KEGG   Pteropus alecto (black flying fox): 102889157
Entry
102889157         CDS       T02993                                 
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03082  ATP-dependent chromatin remodeling
pale05165  Human papillomavirus infection
pale05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102889157 (CHD4)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    102889157 (CHD4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102889157 (CHD4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pale03036]
    102889157 (CHD4)
Chromosome and associated proteins [BR:pale03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102889157 (CHD4)
  Chromatin remodeling factors
   NuRD complex
    102889157 (CHD4)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo ResIII HDA2-3 PHD_2 DEAD zf-PHD-like
Other DBs
NCBI-GeneID: 102889157
NCBI-ProteinID: XP_006914687
Position
Unknown
AA seq 1940 aa
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPRPENEEDPEEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKSKSKRKEEEEEDDDDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKA
FSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESM
VTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGG
FGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVT
AVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ
WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL
PEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPE
RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKN
KDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVE
IQDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLD
ATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLV
SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE
ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL
TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKA
DVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCN
HPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLD
LLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVR
PGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDR
NQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPRPPPMGRSTRAVGPAHLPSLP
PDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIE
VLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGA
DGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQ
PGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGIKIEENNLKEEESAEGEKEVKSAAPEATV
ECAQPPAPASEDEKVLVEPPEGEEKVEKAEVKERTEEPMETEPKGVADAEKVEEKSAIDL
TPIVVEDKEEKKEEEEKKEVMLQNGETPKDLNDEKQKKNIKQRFMFNIADGGFTELHSLW
QNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRG
NFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESH
QHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNI
LSRLANRAPEPTPQQVAQQQ
NT seq 5823 nt   +upstreamnt  +downstreamnt
atggcgtcgggcctgggctccccgtccccctgctcggcgggcagcgaggaggaggatatg
gatgcacttttgaacaacagcttgcccccaccccgcccagaaaacgaagaggacccagaa
gaggatttgtcagaagcagagactccaaagctcaagaagaagaaaaagcctaagaaacct
cgggaccctaaaatccctaagagcaagcgccaaaaaaaggagcgtatgctcttatgccgg
cagctgggggacagctctggggaggggccggagtttgtggaggaggaagaagaggtggct
ctgcgctcagacagtgagggcagcgactatactcctggcaagaaaaagaaaaagaagctt
ggacctaagaaagaaaagaagagcaaatccaagcggaaggaagaggaggaggaggatgac
gatgatgatgattcaaaggagcctaaatcatctgctcagctcctggaagactggggcatg
gaagacattgaccatgtgttctcagaggaggattatcgcaccctcaccaactacaaggcc
ttcagccagtttgtccgaccccttattgctgccaaaaaccccaagattgctgtctccaag
atgatgatggttttgggtgcaaagtggagggagttcagcaccaacaaccccttcaaagga
agttctggggcttcagtggcagcagcagcagcagcagccgtggccgtggtggagagcatg
gtgacagccactgaagttgcaccacctcctccccctgtggaggtgcctatccgaaaggcc
aagaccaaggagggcaaaggtcccaatgctcggaggaagcccaagggcagccctcgtgta
cctgatgccaagaagcctaaacccaagaaagtggctcccctgaaaatcaagttgggaggt
tttggttctaagcgcaagagatcctcgagtgaggatgatgatttagatgtggaatctgac
tttgacgatgccagtatcaatagctattctgtttccgatggttccaccagccgtagtagc
cgcagccgcaagaaactccgaaccactaaaaagaaaaagaaaggcgaggaggaggtgact
gctgtggatggttatgagacagaccaccaggactattgcgaggtgtgccagcaaggtggc
gagatcatcctgtgtgatacctgtccccgagcttaccacatggtctgcctggatccagat
atggagaaggctcctgagggcaagtggagctgcccacactgtgagaaggaaggcatccaa
tgggaggctaaagaggacaattcagagggtgaggagatcctggaagaggttgggggagac
cctgaagaggaggatgaccaccatatggaattctgtcgggtctgcaaggatggcggggag
ctactctgctgtgacacctgtccttcttcctaccacatccactgcctaaaccccccactt
ccagagattcccaacggcgagtggctctgtcctcgttgtacatgtccagctcttaaaggc
aaagtccagaagattctaatctggaagtggggtcagccaccatctcccacaccagtgcct
cggcctccagatgctgatcccaatactccctcacctaagcccttggaagggcggccagag
cggcagttctttgtgaaatggcaaggcatgtcttattggcactgctcctgggtgtctgaa
ctgcagttggagctgcactgtcaagtgatgttccgaaattatcagcggaagaatgatatg
gatgagccgccttctggggactttggtggtgatgaagagaagagtcgaaagcgaaagaac
aaggaccctaaatttgcagagatggaggaacgcttttatcgctatgggataaaacctgag
tggatgatgatccaccggattctcaaccacagtgtggacaagaagggccatgtccactac
ttaatcaagtggcgagacttgccctatgatcaggcatcctgggagagcgaagatgtggag
atacaggactatgatctgtttaagcagagctattggaatcacagggagttaatgaggggt
gaggaaggccgaccaggcaagaaactcaagaaggtgaagctgaggaagttggagaggcct
cctgaaactccaacagttgatccaacagtgaagtatgagcgacagccagagtacctggat
gccacaggtggaactctgcacccctatcaaatggagggcttgaattggttgcgcttctcc
tgggctcagggcacggacaccatcttggctgatgaaatgggccttgggaagactgtccag
acagctgtcttcctctattctctctataaggagggtcattccaaaggccccttcctagtg
agtgctcctctttctaccatcatcaactgggagcgggagtttgaaatgtgggctccagat
atgtatgtggtgacttatgtgggtgacaaagacagccgggccatcatccgagagaatgag
ttctccttcgaagacaatgccattcgaggtggcaagaaggcctctcgcatgaagaaagag
gcatctgtgaagttccatgtgctgctgacatcctatgagttgatcaccattgacatggct
atcttgggctctattgactgggcctgccttatcgtggatgaagcccatcggctcaagaac
aatcagtctaagttctttcgggtcttgaatggttactcactccagcacaagctgttgctg
actgggactccattacaaaacaatctagaagaactgtttcatctgctcaactttctcacc
cctgagaggttccacaatttggaaggcttcttggaggagtttgctgacattgccaaggaa
gaccagattaaaaaactgcatgacatgctggggcctcacatgctgcggcgactcaaagct
gacgtgttcaagaatatgccctccaagacagagctgattgtgcgtgtggagctaagccct
atgcagaagaagtactacaagtatatcctcactcgaaattttgaagctctcaatgctcgg
ggtggtggcaaccaggtctctctgctgaatgtggtgatggatcttaagaagtgctgcaac
cacccatatctcttccctgtggctgcaatggaagcccctaagatgcctaatggcatgtat
gatgggagtgccctaatcagagcatctgggaaattattgctgctacagaagatgctcaag
aaccttaaggagggtgggcaccgtgtactcatcttctcccagatgaccaagatgctggac
ctgctagaggatttcttggaacatgaaggttataaatatgaacgtattgatggtggaatt
actgggaacatgcgtcaagaggccattgaccgcttcaatgcaccaggtgctcagcagttc
tgcttcttgctttctactcgtgctgggggccttggaatcaatctggccactgctgacaca
gttattatctatgactctgactggaacccccataatgacatccaggcttttagcagagct
caccgtattgggcagaataagaaagtgatgatctatcggtttgtgacccgtgcatcagtg
gaggagcgtattacacaggtggcaaagaagaagatgatgttgacacatctagtggttcgg
cctgggctgggctccaagactggatctatgtccaaacaggagcttgatgacatcctcaag
tttggcactgaggaactattcaaagatgaagccacagatggaggaggagataacaaagag
ggagaggatagcagtgttatccactatgatgataaggccattgaacgactgttggaccgt
aaccaggatgagactgaagacacagaattgcagggcatgaatgaatatttgagctctttc
aaagtggcccagtatgtggtacgggaagaggagatgggggaggaagaggaggtagaacgg
gaaatcataaaacaggaagaaagtgtggatcctgactactgggagaaattgctgcggcac
cattatgagcagcagcaagaagatctggcccgaaatctgggcaaaggaaaaagaatccgt
aaacaggtcaactacaatgatggctcccaggaggaccgaggtgtgtgtggccggccccgc
cccccacccatgggccgttccactagagcagtgggccccgctcatctgccctctctccct
ccagattggcaggacgaccagtccgacaaccagtccgattattcagtggcctcagaggaa
ggtgatgaagactttgatgaacgatctgaagctccccgtaggcccagtcgcaagggcctg
cggaatgataaagataagccattgcctcctctgttggcccgtgttggtgggaatattgaa
gtacttggttttaatgctcggcagcgaaaagcctttcttaatgcaatcatgcgatatggg
atgccacctcaggatgcttttaccactcagtggcttgttagagatctgcgaggcaaatca
gagaaagagttcaaggcttacgtttctcttttcatgcggcatttatgtgagccgggagca
gatggggctgagacctttgctgatggtgttccccgagaaggcctgtctcgccagcatgtc
cttactaggattggcgtcatgtccttaattcgcaaaaaggttcaggagtttgaacatgtt
aatgggcgctggagtatgcctgaacttgctgaagtagaggaaaacaagaaaatgtcccag
ccagggtcaccttccccaaagactcctacaccctccactccaggggacacacaacccaat
actcctgcgcctgccccacctgctgaggatggaataaaaatagaagaaaataatctcaaa
gaagaagagagtgcagaaggagaaaaagaggttaagtctgcagcccctgaggctactgtt
gagtgtgcacaaccccctgctcctgcctcagaggatgaaaaggtccttgttgaacctccc
gagggagaggagaaagtggaaaaggcagaggtgaaggagagaacagaagaacctatggag
acagaacccaaaggtgttgctgatgcggagaaggtggaggaaaagtcagcaatagatctg
acccccattgtggtagaggacaaagaagagaagaaagaagaagaagagaaaaaagaggtg
atgcttcagaatggagagacccccaaggacctaaatgacgagaagcagaagaaaaatatt
aaacagcgtttcatgttcaacattgcagatggtggttttactgagttgcactccctttgg
cagaatgaggagcgggcagccacagtcaccaagaagacttacgagatctggcatcgaagg
catgactactggctgctggctggcatcataaaccacggctatgcccggtggcaggacatc
cagaatgacccacgctatgccatcctcaatgagcctttcaagggtgaaatgaaccgtggc
aatttcttagagatcaagaataagtttctagcccgaaggttcaagctcctagaacaagcc
ctggtgattgaggaacagttgcgccgggcagcttacctgaatatgtcagaggacccctct
cacccttccatggccctaaacacccgctttgctgaggtggagtgtttggcggaaagtcat
cagcacctgtccaaggagtcaatggcaggaaacaagcctgccaatgcggtcctgcacaaa
gttctgaaacagctagaagaactgctgagtgacatgaaagctgatgtgactcgactccca
gctactattgcccgaattcccccggttgctgtgaggctacagatgtcagagcgtaatatt
ctcagccgcctggcaaaccgagcacctgaacctactccacagcaggtagcccagcagcag
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (13)   
   Pfam (13)   
All databases (73)   

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