KEGG   Pteropus alecto (black flying fox): 102889870
Entry
102889870         CDS       T02993                                 
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
  KO
K07466  replication factor A1
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03030  DNA replication
pale03420  Nucleotide excision repair
pale03430  Mismatch repair
pale03440  Homologous recombination
pale03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102889870 (RPA1)
   03420 Nucleotide excision repair
    102889870 (RPA1)
   03430 Mismatch repair
    102889870 (RPA1)
   03440 Homologous recombination
    102889870 (RPA1)
   03460 Fanconi anemia pathway
    102889870 (RPA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pale03000]
    102889870 (RPA1)
   03032 DNA replication proteins [BR:pale03032]
    102889870 (RPA1)
   03400 DNA repair and recombination proteins [BR:pale03400]
    102889870 (RPA1)
Transcription factors [BR:pale03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    102889870 (RPA1)
DNA replication proteins [BR:pale03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    102889870 (RPA1)
DNA repair and recombination proteins [BR:pale03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     102889870 (RPA1)
   MMR (mismatch excision repair)
     102889870 (RPA1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     102889870 (RPA1)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon IBR DUF223
Other DBs
NCBI-GeneID: 102889870
NCBI-ProteinID: XP_006925135
Position
Unknown
AA seq 616 aa
MVVHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNTLVEDEQLSSNCICQINRFIVNTLKDGRRVIILMELSILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPVSAASPPTSKPQQQNGSSGVGSTVSKAFGASKTFGRAGGTSLVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVIPCEDGHHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVSATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSILSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGIAGSNTNWKTLYEAKSENLGQGDKADYFSSVATVVYLRKENSMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYVGELKEKNEQAFEEIFQNANFRSFIFKIRVKLETFNDESRIKAVVMDVKPVDFR
EYGRRLIMNIRKNALI
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggtggtccacctgagcgaaggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagttattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatgggttgaacaccctatcctctttcatgttggcaaca
cagttgaacactcttgttgaagatgaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacacactgaaagatggaaggagagtaattattttaatggagttaagc
attttgaaatcagctgaagcagttggattaaagattggcaatccagtgccctataatgaa
ggacatggacaacagcaggtagttccttctccagtctcagcagccagtccaccaaccagc
aagccccagcaacagaatgggagctcaggagtgggttccactgtatctaaggcttttgga
gcctcaaagacatttggaagagctggaggtaccagcctagtgaacagttctggaggaaca
caagccaaagtagtacctattgccagcctcaccccttaccaatccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattctcgaggggaagggaag
cttttctctatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttccccttattgatgtgaacaaggtctattatttctctaaaggt
actctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcataccctgtgaagatggtcatcatttacccacagttcagttt
gatttcacggggattggtgacctagagagcaaatctaaggattcacttgtagacataatt
gggatctgcaagagctatgaagatgccactaaaatcacggtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtggtatctgcaactctg
tggggagaagatgctgataaatttgatggttctagacaacctgtgatggctatcaaagga
gccagggtttctgattttggtggacggagcctgtctatactgtcttcaagcacaatcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctcggatctaaagagtggaggaatagcagggagcaacacc
aactggaaaactttgtatgaggctaagtcagagaacctgggccaaggcgacaaggcagac
tattttagctctgtggcaacagtggtgtatcttcgcaaagagaactctatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgt
gagaagtgtgaccgtgaatttccaaatttcaagtaccgcatgatcctgtcagtaaatatt
gccgattttcaagaaaatcagtgggtgacttgtttccaggaatctgcagaggctatcctc
ggacaaagcactgcttatgttggggagttaaaagagaagaatgaacaggcatttgaagaa
attttccagaatgccaactttcgatctttcatattcaagatcagggtcaaactagagacc
ttcaatgatgagtctcgaattaaggccgttgtgatggatgtgaagcctgtggacttcaga
gaatatggcagaaggctgatcatgaacatcaggaaaaatgcactaatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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