KEGG   Paracoccus aminophilus: JCM7686_3013
Entry
JCM7686_3013      CDS       T02792                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pami  Paracoccus aminophilus
Brite
KEGG Orthology (KO) [BR:pami00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pami03016]
    JCM7686_3013
Enzymes [BR:pami01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     JCM7686_3013
Transfer RNA biogenesis [BR:pami03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    JCM7686_3013
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AGT10049
UniProt: S5XRM6
Position
complement(3111098..3111712)
AA seq 204 aa
MSITLHQNDLPDHLDLGSVVAIDTETMGLDPRRDRLCLVQLSAGDGSAHLVQIARGQREA
PNLVRLLQDPAVLKLFHFGRFDIAALENAFGVRTAPVWCTKIASKLIRTYTDRQGLKYLL
SELCGIDISKQQQTSDWGAALLSDAQRDYAASDVLYLHGLKAELEKRLEREGRSALAQSC
FDFLPTRAHLDLLGWGDEKDIFHH
NT seq 615 nt   +upstreamnt  +downstreamnt
atgagcattactctccatcaaaacgacctgccggatcatctggatcttggatccgtggtc
gcgatcgataccgagacgatgggccttgatccgcgccgtgaccggctgtgccttgtccag
ctttcggccggagacggttcggcccatttggtccagatcgcgcgcggtcagcgtgaggct
ccgaatctggtgcggctgttgcaagatcctgccgtgctcaagctcttccacttcgggcgc
ttcgatattgccgcgctggaaaatgcatttggcgtccgcaccgctccggtctggtgcacc
aagatcgcctcgaagctgatccgaacctataccgaccggcaggggctgaaatatctgctg
tccgagctttgcggcatcgacatttccaagcagcagcagaccagcgattggggcgcggcc
ctgctcagcgatgcgcagcgcgactatgccgcctcggatgtgctttaccttcacggcctg
aaagccgaacttgaaaagcggctcgagcgtgagggccgcagcgccttggcgcaatcctgc
tttgatttcctgcccacccgcgcccatctcgatcttctgggctggggggatgaaaaagac
atcttccaccattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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