KEGG   Paracoccus aminophilus: JCM7686_pAMI4p352
Entry
JCM7686_pAMI4p352 CDS       T02792                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pami  Paracoccus aminophilus
Pathway
pami03030  DNA replication
pami03430  Mismatch repair
pami03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JCM7686_pAMI4p352
   03430 Mismatch repair
    JCM7686_pAMI4p352
   03440 Homologous recombination
    JCM7686_pAMI4p352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pami03032]
    JCM7686_pAMI4p352
   03400 DNA repair and recombination proteins [BR:pami03400]
    JCM7686_pAMI4p352
Enzymes [BR:pami01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JCM7686_pAMI4p352
DNA replication proteins [BR:pami03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JCM7686_pAMI4p352
DNA repair and recombination proteins [BR:pami03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JCM7686_pAMI4p352
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AGT11038
UniProt: S5YHV2
Position
pAMI4:403144..403785
AA seq 213 aa
MPRLPDLNLIVPVSPFRFVALDVETANSDPASICQIGIACVADNGSIDVFSALVDPAQRF
SGFNVQLHGIGPDRVIGAPRFPQILSLISPLLEGHLIIQHSTFDSRAITGACRANGLPDP
SWRWANSVTIARRAWPAFRGNGGHGLGHLKKALGLDFAHHDAGEDAKAAAMVVLRAEAQT
GLSLEELILAQNRSPGRKPRAARPEADGILVQS
NT seq 642 nt   +upstreamnt  +downstreamnt
atgccgcgattgcctgacctcaacctcatcgttccggtcagcccgtttcggtttgtcgct
ctggatgtcgagacggccaattcggatcccgcaagcatttgccagatcggtatcgcctgt
gttgccgataacggctcgatagacgtgttcagcgcgttggttgacccagcgcagagattc
tcgggcttcaacgtgcaactccacggtatcggacctgaccgcgtcatcggcgcaccgaga
tttccgcagatattgtcgctgatctcgccgctgctcgaggggcatctcatcatccagcac
agcacctttgacagcagggccatcactggcgcgtgccgggccaatggtttgcccgatccg
agctggcgttgggcgaatagtgtcacgattgcgcgccgggcctggcccgcgtttcgcggc
aatggcgggcatgggcttggccatctgaagaaggcactggggctcgatttcgcacatcac
gatgcgggcgaggatgcgaaggccgcggccatggtcgtgttgcgagcggaggcgcagacc
gggctgtcgctggaggagctgattttagcgcaaaaccggtctccgggccgcaagccaagg
gcggcaaggcccgaagcagatggaattctggttcaatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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