KEGG   Pantoea sp. PSNIH2: PSNIH2_12270
Entry
PSNIH2_12270      CDS       T03514                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
panp  Pantoea sp. PSNIH2
Pathway
panp03030  DNA replication
panp03430  Mismatch repair
panp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:panp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSNIH2_12270 (holA)
   03430 Mismatch repair
    PSNIH2_12270 (holA)
   03440 Homologous recombination
    PSNIH2_12270 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:panp03032]
    PSNIH2_12270 (holA)
   03400 DNA repair and recombination proteins [BR:panp03400]
    PSNIH2_12270 (holA)
Enzymes [BR:panp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSNIH2_12270 (holA)
DNA replication proteins [BR:panp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSNIH2_12270 (holA)
DNA repair and recombination proteins [BR:panp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSNIH2_12270 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C CDC24_OB2
Other DBs
NCBI-ProteinID: AIX74468
Position
2654109..2655140
AA seq 343 aa
MIRIYPEQLHAQLREGLRACYLLIGNEPLLLQESHDAIKACAQQQGFTEHFNVVLDNSTD
WDAVFSSCQSMSLFASRQTLTLTLPENGPNAAIAAQLEKLSTLLHSDMLPIIIGARLTKA
QENSAWFKAFSVQAVLVPCATPEHGQLPRWVAARAKGMKLDLDEAACQLLCYCYEGNLLA
LSQALERLSLLWPDGKLTLPRVEQAVSDAAHFTPFHWVDALLAGKSKRALHILRQLAAED
SEPVILIRTLQRELLLLLTLQRQQDKAPLRVLFDQHRVWQNRRALFSDALQRLSLLQIRQ
AIQLLTRLEITLKQDYGQRLWPELETLSLLLCNKALPAELGEF
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgatcaggatttaccctgaacaactgcacgcgcagctccgcgaggggctgcgcgcctgt
tatctgctgattggcaacgaaccgctgctgctgcaggaaagccatgatgcgattaaagcc
tgtgcgcagcagcagggttttactgaacacttcaacgttgtgctggataacagtaccgac
tgggacgccgttttcagcagctgccagtcgatgagcctgttcgccagtcgtcaaacgctg
acgctgacgctgccggaaaacggccccaacgcagcgatcgccgcccagctggaaaagctg
agcacgctgctgcacagcgatatgctgccgattatcatcggcgccagattaaccaaagcc
caggaaaacagcgcctggtttaaagcctttagcgttcaggcggtgctggtgccctgcgcc
acgcccgaacatggccagctcccgcgctgggtcgccgcgcgcgctaaagggatgaagctc
gacctcgacgaggcggcctgtcagctgttgtgttactgctacgaaggcaatttgctggcg
ctgtctcaggcgctggaacgcctctccctgctctggccggacggcaaactgacgctgccg
cgcgtcgagcaggcagtcagcgatgcggcgcactttacgccgttccactgggtcgatgcg
ctgctggcgggcaaaagcaaacgcgctctgcatattttgcgacagctcgccgcggaagat
agcgagccggtgatcctgatccgtactctgcaacgcgaactgctgctgctgctgacctta
cagcgtcagcaggataaagcgcctctgcgcgtgctgttcgatcagcatcgcgtctggcaa
aaccgtcgcgcgttattcagcgacgcgctgcaacgcctgtcgctgctgcagattcggcag
gcgattcagctactgacccgcctggaaatcacattaaagcaggattatggtcagcgcctc
tggccggaactggaaaccctctcgctgttgctttgtaataaagcgttaccggcggaatta
ggcgaattttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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