KEGG   Pseudomonas antarctica: A7J50_2550
Entry
A7J50_2550        CDS       T04830                                 
Name
(GenBank) EvpB family type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
panr  Pseudomonas antarctica
Pathway
panr02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:panr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    A7J50_2550
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panr02044]
    A7J50_2550
Secretion system [BR:panr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A7J50_2550
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ANF85949
UniProt: A0A172Z1Q5
Position
2774853..2776394
AA seq 513 aa
MSLEQSSATTLSNKTYYAGSDQGVYGTLFAKINLSPVAALSGIEVFQNSEALSDASADER
VTAGVRVFLDLLKQSSHKVERLDKALLDEHIASLDEQISRQLDAVMHHPDFQRVESTWRG
VKSLIDQTDFRQNVRIELLDISKEHLVQDFEDAPEIAQSGLYLHTYTQEYDTPGGEPIAA
AISNYEFSRSPQDIALLRNISKVSAAAHMPFIGSVGPAFFGKKSMEEVAAIKDIGNYFDR
AEYIKWKAFRDSDDARYIGLTMPRVLGRLPYGPDTVPIRSFNYIESVKGPDHEKYLWTNA
SFAFAANMVKSFITNGWCVQIRGPQSGGAVTELPIHLYDLGTGNQVKIPSEVMIPETREF
EFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAHY
LKLIQRENIGTTKDRRLLELELNKWIGGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDNP
GFFLVKLYAVPHFQVEGMDVSLSLVSQMPKAKA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcactagagcaatcatccgcaaccacactgtccaataagacttattatgcaggcagt
gaccagggtgtctatggcaccttgtttgccaagattaatctcagtcctgttgctgcgtta
agtggtattgaggtttttcaaaactccgaagccctatccgatgcttctgctgacgagcgg
gtaactgcgggtgtaagagtctttctggatttgctaaagcagtcgtcgcataaagtagag
cgcttagataaagccttgttggatgaacacatcgcttccctggatgagcagattagtcgc
caacttgatgcggtcatgcatcaccccgattttcagcgcgtagagtcaacttggcgtggt
gtgaagtcgttgatagatcagaccgattttcgtcagaacgtgcgtatcgaactactggat
ataagcaaagagcatctggtgcaagacttcgaagacgctccggaaattgcccagagcggc
ttgtatttgcacacttatactcaggagtacgacaccccaggtggagaaccgattgcagca
gctatctccaactatgagtttagtcgcagtccgcaagatattgccctgttgcgcaatatt
tccaaagtgtcagcggcagcccacatgccgttcattggatctgtcggtccggcgttcttt
ggcaagaagtcgatggaagaagtggctgctatcaaggatatcggcaactattttgaccgt
gctgaatacatcaagtggaaggcgttccgtgacagcgacgatgcacgttacatcggtctg
accatgccacgtgtcctgggtcgccttccttacggtccggacacagtgccgatccgcagc
ttcaactacatcgaaagtgtgaaggggccggaccacgagaaatacctgtggactaacgct
tcgttcgccttcgcggcaaatatggtgaaaagctttatcaccaacggttggtgcgtgcag
attcgcggtccgcaatcgggtggcgcggtcacggaactaccgattcacctatatgacctg
ggcactggcaaccaggtaaagattccatccgaagtgatgattccggagacccgtgagttt
gaattcgccaatctcggttttatcccgttgtcgtattacaaaaaccgcgattatgcttgt
ttcttctcggccaactcagctcaaaagccggctctgtatgacaccgccgacgccactgcc
aatagccgaatcaatgcccgcctgccatacattttcctcctgtcgcgtattgcccattac
ctgaagctgatccagcgcgagaacatcggtaccaccaaggatcgtcgcttgctggagttg
gagctaaacaagtggatcggcggcctcgtcactgaaatgaccgatccgggcgacgatttg
caagcctcccacccgctgcgcgatgccaaggtgacggtagaggacattgaggacaacccc
ggtttcttcctcgtcaagctgtatgcggtaccgcacttccaggtcgaaggcatggacgtc
agtttgtcattggtttcgcagatgcccaaggcaaaagcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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