KEGG T01386: Pat9b

Pantoea sp. At-9b: Pat9b_1115

Entry

Pat9b_1115 CDS T01386

Definition

2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pao Pantoea sp. At-9b

Pathway

pao00020	Citrate cycle (TCA cycle)
pao00310	Lysine degradation
pao00380	Tryptophan metabolism
pao01100	Metabolic pathways
pao01110	Biosynthesis of secondary metabolites
pao01120	Microbial metabolism in diverse environments

Module

pao_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pao_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pao00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pao00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pao00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1254611..1257418

AA seq 935 aa
MQNSAMKPWLDSSWLAGANQSYIEQLYEDFLTDPDSVDAVWRDMFQQLPGTGVKPEQFHS
TTRDYFRRLAKDATRYTSTVTDPAANSKQVKVLQLINAFRFRGHQHANLDPLGLWKQDAV
PDLDPVYHDLTDADFQESFNVGSFAIGKETMKLADLYEALKQTYCGSIGAEYMHITNTDE
KRWIQQRIESVVGHATFSTEEKKGFLKELTAAEGLEKYLGAKFPGAKRFSLEGGDALVPM
LREMIRHAGKSGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFSGKHKEHLGTGDVKYH
MGFSSDVETEGGLVHLALAFNPSHLEIVSPVVMGSVRARLDRLAEPSSNKVLPITIHGDA
AVTGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAP
IFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIK
KHPTPRKIYADRLEADGIAKLEDATEMVNLYRDALDAGECVVPEWRPMSLHSFTWSPYLN
HDWDESYPATVEMKRLQELARRISQVPEAVEVQARVAKIYNDRKEMAEGNKAFDWGGAEN
LAYATLVDEGIPVRLSGEDSGRGTFFHRHAVVHNQANGSTYTPLHHIHHGQGQFKVWDSV
LSEEAVLAFEYGYATAEPRVLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLIVMSP
KSLLRHPLAISTLDELANGSFQPAIGEIDALDAKQVKRVVMCSGKVYYDLLEQRRKNEKN
DVAIIRIEQLYPFPHKAVQEALKAYAHVQDFVWCQEEPLNQGAWYCSQHHFREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNLG

NT seq 2808 nt +upstreamnt +downstreamnt
atgcagaacagcgcgatgaagccctggctggactcctcctggctggccggcgcgaaccaa
tcttacatagagcaactctatgaggatttcctgaccgatcctgactctgttgatgcagtg
tggcgcgacatgttccaacagctgcctggcaccggcgtgaaacctgagcagtttcactcc
accacgcgcgattacttccgccgcctggctaaagacgcaacgcgttacacttccacagtc
actgatccggccgctaactctaaacaggttaaggtgctgcagctgatcaacgccttccgc
tttcgcggacaccagcacgctaaccttgatccactcggcctgtggaagcaggacgccgta
ccggatctcgacccggtatatcacgacctgaccgacgccgattttcaggaaagctttaac
gtaggttcttttgctatcggcaaagaaaccatgaagctggccgatctctatgaagcgctg
aaacagacctactgtggctccatcggtgccgaatacatgcacatcaccaataccgacgaa
aaacgctggattcagcagcgcattgaatcggtggtgggacacgcgacattcagcactgaa
gagaaaaaaggtttcctgaaagagctgaccgcggcagaagggttggaaaaatacctcggc
gcgaaattccctggtgcgaaacgcttctcgctggaagggggtgatgcgctggtaccgatg
ctgcgtgagatgatccgccatgccggtaaaagcggcacccgcgaagtggtgctgggtatg
gcgcaccgtggtcgtctgaacgtactgatcaacgtactgggcaaaaagccacaggatctg
ttcgacgagttctccggtaaacataaagaacatctcggcaccggtgacgtgaagtaccat
atgggcttctcgtcagacgtggaaaccgaaggcggtctggtgcacctggcgctggcgttt
aacccgtcgcacctggaaatcgttagcccggtggtaatgggttcagtgcgtgcgcgtctc
gatcgtctggcggaaccgagcagcaataaagtgctgccgatcaccattcacggtgatgca
gcggtaaccggtcagggcgtggtgcaggaaaccctgaacatgtcgcaggcacgcggttac
gaagtgggcggaacggttcgcatcgtgatcaacaaccaggtgggcttcaccacctcgaat
ccgctggatgcccgctcaacgccgtactgtactgatatcggtaaaatggtgcaggccccg
attttccacgttaacgcggacgatccggaagccgttgcctttgttacccgtctggcgctc
gactatcgcaacaccttcaaacgtgatgtgtttatcgacctggtgtgctaccgccgtcat
ggccataacgaagccgacgagccaagcgccacccagccgctgatgtaccagaaaatcaaa
aagcatccgacgccgcgtaaaatttacgctgaccgtctggaagccgatggcattgcgaaa
ctggaagatgccaccgagatggtcaacctgtaccgcgatgcactggatgccggtgaatgc
gtggtgccggaatggcgtccgatgagtctgcactcctttacctggtcaccgtatctcaac
cacgactgggatgagagctatccggcgactgtggaaatgaaacgtttgcaggaactggct
cgccgtatcagccaggtaccggaagcggttgaagtccaggcgcgtgtcgccaagatttac
aacgatcgtaaagagatggccgaaggcaacaaagcctttgactggggcggcgcggaaaac
ctcgcttacgccacgctggtcgatgaaggcatcccggtccgtctgtcaggtgaagactct
ggccgtggcaccttcttccaccgtcatgcggtggtgcacaaccaggcgaacggttcaacc
tatacgccgttgcaccatatccatcatggtcagggccagttcaaagtctgggactcggtg
ttgtctgaagaagcggtgctggccttcgaatacggttatgccaccgcagaaccccgcgtg
ctgaccatctgggaagcgcagttcggtgactttgccaacggtgcacaggtggtgatcgac
cagttcatcagctctggcgagcagaagtggggccgtatgtgtggcctggtgatgctgctg
ccgcacggttacgaaggtcaaggcccggagcactcctccgcccgtctggagcgctatctg
caactctgtgctgaacagaatatgcaggtgtgtgtgccgtctacgccggcgcaggtttac
catatgctgcgtcgtcaggcgctgcgcggtatgcgtcgtccgttgatcgtgatgtcaccg
aagtcgctgctgcgtcatccgctggcgatttccaccctcgacgaactggctaacggtagc
ttccagcccgcgatcggcgagatcgatgcgcttgatgcgaaacaggtaaaacgcgtcgtg
atgtgttctggtaaggtttattacgacctgctggaacaacgtcgtaagaatgagaagaac
gacgtcgcgattattcgtattgagcagctgtacccgttcccgcataaagcggtacaggaa
gcattaaaagcttatgcccatgtgcaggattttgtctggtgtcaggaagaaccgctgaat
cagggcgcatggtactgcagtcagcatcatttccgcgaagtgattccgtttggtgcgtca
ctgcgttatgcaggccgtccggcttctgcttcaccggccgtgggctacatgtccgtacat
caaaaacagcagcaagacctggttaacgacgcgctgaaccttggttaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PAO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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