KEGG T01386: Pat9b

Pantoea sp. At-9b: Pat9b_2253

Entry

Pat9b_2253        CDS       T01386

Name

(GenBank) RNA methylase, NOL1/NOP2/sun family

K11392

16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]

Organism

pao Pantoea sp. At-9b

Brite

KEGG Orthology (KO) [BR:pao00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pao03009]
    Pat9b_2253
Enzymes [BR:pao01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     Pat9b_2253
Ribosome biogenesis [BR:pao03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Pat9b_2253

SSDB

Motif

Pfam:

Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 PCMT Cons_hypoth95 Rap1_C

Other DBs

NCBI-ProteinID:

ADU69563

UniProt:

E6W9Z8

Position

2462713..2464131

AA seq 472 aa
MSDRFPEDFLALMRTSLTDDAEMQRFIAISQQPLRRSLRVNTLKISVADFLAQTADYGWR
LTPIPWCAEGFWIDRDDESLPLGSVAEHLSGLFYIQEASSMLPVAALFDAAPDAHQVMDV
AAAPGSKTTQIAALMHNQGAILANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGAAL
PEQFDAILLDAPCSGEGVVRKDPDALRNWTLASTEEIAATQRDLIDSAFHALQPGGTLIY
STCTLNQIENQQVISWLQQRYPGTVEILSLAGLFEGAEQALTPEGYLHVFPHIFDSEGFF
VARLRKTASLPALPAPSYKLGKLPFSPASRKLLAEVQQAAAKVGLSWDDNLQLWQRDKEL
WLFPAALESWLNKVRFSRIGVKLAETFPKGYRWQHEAVVALAQPNTALSFALTAAEAESW
YRGQDIHPENVPDRDEVIVTYQQQTLGLAKKVGNRIKNSYPRELVRDGRLFR

NT seq 1419 nt +upstreamnt +downstreamnt
gtgtccgatcgctttcctgaagattttcttgcgctaatgcgtaccagtttgaccgacgat
gctgagatgcaacgctttatcgccatcagtcaacaacccctgcgtcgcagcctgcgcgtc
aacaccttaaaaattagcgtggccgattttctcgcacaaacggcagattacggctggcga
cttacgccgatcccgtggtgtgcggaaggattctggatcgatcgcgacgacgaatcactg
ccattgggcagcgtggcagagcacctcagcgggttgttttatattcaggaagccagctca
atgcttccggtggcagcattgtttgacgcagcaccggatgcgcaccaggtgatggatgtc
gccgctgcgccggggtcaaaaaccacacaaatcgccgccttgatgcacaaccagggtgca
attctggctaacgaatactccgccagccgtgtcaaagtgctgcacgctaacatcagccgt
tgcggcgtcagtaatgtcgctctcacccatttcgatggccgggtgtttggtgccgcgtta
ccggagcagttcgatgccatcctgctggatgcaccctgttccggggaaggcgtggtgcgt
aaagaccctgatgcgctgcgcaactggacactggccagcactgaagagattgccgccacc
cagcgcgatctcatcgacagcgcctttcatgcgttgcaacctggcggtacgttaatctat
tccacctgtaccctgaatcagattgagaaccagcaggtgattagctggttgcagcaacgc
tatcccggcacggtcgaaattttatcgctggcaggcctgttcgagggcgcagaacaggca
ctgacaccggaaggctatctgcacgttttcccgcatatttttgacagcgaggggttcttt
gttgcccgcctgcgtaaaactgccagcctgcccgcattgccagcgcccagctataaactg
ggtaaactgcccttctcacctgccagccgaaaattgctcgccgaagtgcagcaggccgcc
gcgaaggtcggtttaagctgggatgataatttgcagttgtggcagcgcgataaagagctg
tggctgttccctgctgcgctggaaagctggttgaacaaagtgcgcttctcacgcattggt
gtgaagctcgcagagaccttccccaagggatatcgctggcaacatgaagcggtggtggca
ttggcacagccaaacactgcgctgtcctttgccctcaccgcagcagaagcggaaagctgg
tatcgcggtcaggatatccatccggaaaacgtaccggaccgcgatgaagtgattgtgact
tatcagcagcaaacgctggggctggcaaaaaaagtcgggaatcgcatcaaaaatagttat
ccccgtgagttggtacgtgacggtcgcctgtttcgctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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